A filtering method to generate high quality short reads using illumina paired-end technology
about
Identifying contamination with advanced visualization and analysis practices: metagenomic approaches for eukaryotic genome assembliesFirst Draft Assembly and Annotation of the Genome of a California Endemic Oak Quercus lobata Née (Fagaceae)Host-specificity among abundant and rare taxa in the sponge microbiomeHydrogen Limitation and Syntrophic Growth among Natural Assemblages of Thermophilic Methanogens at Deep-sea Hydrothermal Vents18S rRNA V9 metabarcoding for diet characterization: a critical evaluation with two sympatric zooplanktivorous fish species.Microbiological characterization of post-eruption "snowblower" vents at Axial Seamount, Juan de Fuca Ridge.Anvi'o: an advanced analysis and visualization platform for 'omics data.GBS-SNP-CROP: a reference-optional pipeline for SNP discovery and plant germplasm characterization using variable length, paired-end genotyping-by-sequencing data.Comparative Metagenomics of the Polymicrobial Black Band Disease of Corals.The polycyclic aromatic hydrocarbon degradation potential of Gulf of Mexico native coastal microbial communities after the Deepwater Horizon oil spill.Tracking microbial colonization in fecal microbiota transplantation experiments via genome-resolved metagenomics.Analysis of plant microbe interactions in the era of next generation sequencing technologies.Using high-throughput sequencing of ITS2 to describe Symbiodinium metacommunities in St. John, US Virgin IslandsFat binding capacity and modulation of the gut microbiota both determine the effect of wheat bran fractions on adiposity.The microbiota regulates susceptibility to Fas-mediated acute hepatic injuryThe bacterial community structure of hydrocarbon-polluted marine environments as the basis for the definition of an ecological index of hydrocarbon exposure.Sources and distribution of surface water fecal contamination and prevalence of schistosomiasis in a Brazilian village.Sewage reflects the microbiomes of human populations.Oligotyping reveals community level habitat selection within the genus VibrioCharacterization and quantification of the fungal microbiome in serial samples from individuals with cystic fibrosisBlautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.Comparisons of the composition and biogeographic distribution of the bacterial communities occupying South African thermal springs with those inhabiting deep subsurface fracture water.Phaeocystis antarctica blooms strongly influence bacterial community structures in the Amundsen Sea polynya.A single genus in the gut microbiome reflects host preference and specificityTASSEL-GBS: a high capacity genotyping by sequencing analysis pipeline.Analysis, optimization and verification of Illumina-generated 16S rRNA gene amplicon surveys.Rhizosphere heterogeneity shapes abundance and activity of sulfur-oxidizing bacteria in vegetated salt marsh sedimentsMinimum entropy decomposition: unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences.Insight into biases and sequencing errors for amplicon sequencing with the Illumina MiSeq platform.CHOPER filters enable rare mutation detection in complex mutagenesis populations by next-generation sequencing.Decoupled distance-decay patterns between dsrA and 16S rRNA genes among salt marsh sulfate-reducing bacteria.Community assembly of a euryhaline fish microbiome during salinity acclimation.Ability of the gut microbiota to produce PUFA-derived bacterial metabolites: Proof of concept in germ-free versus conventionalized mice.Comparison of Sewage and Animal Fecal Microbiomes by Using Oligotyping Reveals Potential Human Fecal Indicators in Multiple Taxonomic GroupsMicrobiome shifts and the inhibition of quorum sensing by Black Band Disease cyanobacteria.Disparate Metabolic Responses in Mice Fed a High-Fat Diet Supplemented with Maize-Derived Non-Digestible Feruloylated Oligo- and Polysaccharides Are Linked to Changes in the Gut MicrobiotaA distinct and active bacterial community in cold oxygenated fluids circulating beneath the western flank of the Mid-Atlantic ridge.A unique assemblage of cosmopolitan freshwater bacteria and higher community diversity differentiate an urbanized estuary from oligotrophic Lake Michigan.The Characterization of Novel Tissue Microbiota Using an Optimized 16S Metagenomic Sequencing Pipeline.Reconciliation between operational taxonomic units and species boundaries.
P2860
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P2860
A filtering method to generate high quality short reads using illumina paired-end technology
description
2013 nî lūn-bûn
@nan
2013 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
name
A filtering method to generate ...... illumina paired-end technology
@ast
A filtering method to generate ...... illumina paired-end technology
@en
type
label
A filtering method to generate ...... illumina paired-end technology
@ast
A filtering method to generate ...... illumina paired-end technology
@en
prefLabel
A filtering method to generate ...... illumina paired-end technology
@ast
A filtering method to generate ...... illumina paired-end technology
@en
P2860
P1433
P1476
A filtering method to generate ...... illumina paired-end technology
@en
P2093
Joseph H Vineis
Mitchell L Sogin
P2860
P304
P356
10.1371/JOURNAL.PONE.0066643
P407
P577
2013-06-17T00:00:00Z