Identification of Pou5f1, Sox2, and Nanog downstream target genes with statistical confidence by applying a novel algorithm to time course microarray and genome-wide chromatin immunoprecipitation data.

Identification of Pou5f1, Sox2, and Nanog downstream target genes with statistical confidence by applying a novel algorithm to time course microarray and genome-wide chromatin immunoprecipitation data.

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http://www.wikidata.org/entity/Q31157497

Q31157497

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The transcriptional foundation of pluripotency From blastocyst to gastrula: gene regulatory networks of embryonic stem cells and early mouse embryogenesis An Oct4-centered protein interaction network in embryonic stem cells Exposure to the widely used herbicide atrazine results in deregulation of global tissue-specific RNA transcription in the third generation and is associated with a global decrease of histone trimethylation in mice Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors Interaction between DMRT1 function and genetic background modulates signaling and pluripotency to control tumor susceptibility in the fetal germ line The DM domain protein DMRT1 is a dose-sensitive regulator of fetal germ cell proliferation and pluripotency A novel nodal enhancer dependent on pluripotency factors and smad2/3 signaling conditions a regulatory switch during epiblast maturation A general mechanism for transcription regulation by Oct1 and Oct4 in response to genotoxic and oxidative stress Dax1 associates with Esrrb and regulates its function in embryonic stem cells ORTI: An Open-Access Repository of Transcriptional Interactions for Interrogating Mammalian Gene Expression Data.Identifying context-specific transcription factor targets from prior knowledge and gene expression data Functional interpretation of metabolomics data as a new method for predicting long-term side effects: treatment of atopic dermatitis in infants.Novel sequential ChIP and simplified basic ChIP protocols for promoter co-occupancy and target gene identification in human embryonic stem cells.Incorporating existing network information into gene network inference.Gene expression profiling in cells with enhanced gamma-secretase activity.Impairment of developmental stem cell-mediated striatal neurogenesis and pluripotency genes in a knock-in model of Huntington's disease A data integration approach to mapping OCT4 gene regulatory networks operative in embryonic stem cells and embryonal carcinoma cells.Global transcriptional profiles of beating clusters derived from human induced pluripotent stem cells and embryonic stem cells are highly similar ChIP-Array: combinatory analysis of ChIP-seq/chip and microarray gene expression data to discover direct/indirect targets of a transcription factor Critical evaluation of transcription factor Atf2 as a candidate modulator of alcohol preference in mouse and human populations.Chromatin properties of regulatory DNA probed by manipulation of transcription factors.Activation of innate immunity is required for efficient nuclear reprogramming.ADP-ribosyltransferases Parp1 and Parp7 safeguard pluripotency of ES cells An integrated analysis of the SOX2 microRNA response program in human pluripotent and nullipotent stem cell lines.Toward a complete in silico, multi-layered embryonic stem cell regulatory network.A role for borg5 during trophectoderm differentiation Evolution of the mammalian embryonic pluripotency gene regulatory network.A conserved Oct4/POUV-dependent network links adhesion and migration to progenitor maintenance Role of Oct4 in maintaining and regaining stem cell pluripotency.Heterogeneity in Oct4 and Sox2 Targets Biases Cell Fate in 4-Cell Mouse Embryos.An integrative approach to inferring gene regulatory module networks The different shades of mammalian pluripotent stem cells.Ethanol alters the balance of Sox2, Oct4, and Nanog expression in distinct subpopulations during differentiation of embryonic stem cells.Tracing the derivation of embryonic stem cells from the inner cell mass by single-cell RNA-Seq analysis.Ethanol diverts early neuronal differentiation trajectory of embryonic stem cells by disrupting the balance of lineage specifiers Large-scale exploration of gene-gene interactions in prostate cancer using a multistage genome-wide association study.Transcription factor TFAP2C regulates major programs required for murine fetal germ cell maintenance and haploinsufficiency predisposes to teratomas in male mice SOX9 accelerates ESC differentiation to three germ layer lineages by repressing SOX2 expression through P21 (WAF1/CIP1)Dual roles of Oct4 in the maintenance of mouse P19 embryonal carcinoma cells: as negative regulator of Wnt/β-catenin signaling and competence provider for Brachyury induction.

P2860

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P2860

Identification of Pou5f1, Sox2, and Nanog downstream target genes with statistical confidence by applying a novel algorithm to time course microarray and genome-wide chromatin immunoprecipitation data.

Item

http://www.wikidata.org/entity/Q31157497

description

2008 nî lūn-bûn

@nan

2008 թուականի Յունիսին հրատարակուած գիտական յօդուած

@hyw

2008 թվականի հունիսին հրատարակված գիտական հոդված

@hy

2008年の論文

@ja

2008年論文

@yue

2008年論文

@zh-hant

2008年論文

@zh-hk

2008年論文

@zh-mo

2008年論文

@zh-tw

2008年论文

@wuu