Comparison of protein solution structures refined by molecular dynamics simulation in vacuum, with a generalized Born model, and with explicit water.
about
Structure of the ubiquitin-interacting motif of S5a bound to the ubiquitin-like domain of HR23BSolution structure of the zinc finger HIT domain in protein FONThe RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognitionImproving NMR protein structure quality by Rosetta refinement: A molecular replacement studyMinimum-energy path for a u6 RNA conformational change involving protonation, base-pair rearrangement and base flippingSolution structure of the N-terminal catalytic domain of human H-REV107--a novel circular permutated NlpC/P60 domainThe DNA-Binding Domain of Human PARP-1 Interacts with DNA Single-Strand Breaks as a Monomer through Its Second Zinc FingerExperimentally Restrained Molecular Dynamics Simulations for Characterizing the Open States of Cytochrome P450 camNew Tricks of an Old Pattern: STRUCTURAL VERSATILITY OF SCORPION TOXINS WITH COMMON CYSTEINE SPACINGRecombinant A22(G)-B31 (R)-human insulin. A22 addition introduces conformational mobility in B chain C-terminusStructural Basis for Polyadenosine-RNA Binding by Nab2 Zn Fingers and Its Function in mRNA Nuclear ExportWater-refined solution structure of the human Grb7-SH2 domain in complex with the erbB2 receptor peptide pY1139Molecular dynamics re-refinement of two different small RNA loop structures using the original NMR data suggest a common structureSolution structure and antiparasitic activity of scorpine-like peptides from Hoffmannihadrurus gertschiNMR-based simulation studies of Pf1 coat protein in explicit membranesProtein NMR structures refined with Rosetta have higher accuracy relative to corresponding X-ray crystal structuresA practical implicit solvent potential for NMR structure calculation.A refinement protocol to determine structure, topology, and depth of insertion of membrane proteins using hybrid solution and solid-state NMR restraints.A protocol for the refinement of NMR structures using simultaneously pseudocontact shift restraints from multiple lanthanide ions.High quality NMR structures: a new force field with implicit water and membrane solvation for Xplor-NIH.Resolution-by-proxy: a simple measure for assessing and comparing the overall quality of NMR protein structures.Segmented transition pathway of the signaling protein nitrogen regulatory protein CA comparison of four different conformations adopted by human telomeric G-Quadruplex using Computer Simulations.Effects of CMAP and electrostatic cutoffs on the dynamics of an integral membrane protein: the phospholamban study.Simulation of the folding equilibrium of alpha-helical peptides: a comparison of the generalized Born approximation with explicit solventSolution structure of choline binding protein A, the major adhesin of Streptococcus pneumoniae.A dumbbell double nicked duplex dodecamer DNA with a PEG6 tether.Structural characterization of two pore-forming peptides: consequences of introducing a C-terminal tryptophanBayesian inference applied to macromolecular structure determination.A computational study of nucleosomal DNA flexibilitySolid-State NMR-Restrained Ensemble Dynamics of a Membrane Protein in Explicit MembranesA Practical Implicit Membrane Potential for NMR Structure Calculations of Membrane Proteins.Protein-solvent interactionsPrediction of Protein Loop Conformations using the AGBNP Implicit Solvent Model and Torsion Angle SamplingApplications of NMR to membrane proteins.Inhibitory mechanism of peptides with a repeating hydrophobic and hydrophilic residue pattern on interleukin-10.Structural and biophysical insights into the ligand-free Pitx2 homeodomain and a ring dermoid of the cornea inducing homeodomain mutant.Structural Basis for Interaction of the Tandem Zinc Finger Domains of Human Muscleblind with Cognate RNA from Human Cardiac Troponin T.Bounding the electrostatic free energies associated with linear continuum models of molecular solvation.Interpreting the Coulomb-field approximation for generalized-Born electrostatics using boundary-integral equation theory.
P2860
Q27642449-95D49B1F-6E4F-4E17-B2F7-4E5296E4C87DQ27646889-0A9D7024-105E-442B-988B-7039466F3422Q27651271-58740148-7AC1-42D7-A93E-1394BDCB882BQ27652286-35D29BE2-2249-4337-8734-287FD014CCADQ27656362-5CA62E89-8D4D-4A44-89C7-A1AC5BFC4F6FQ27664448-F0A97466-E258-4D3C-B4E4-1A15D7355291Q27666697-6055AF09-07F9-47DA-92DF-B41D13F3AB8EQ27666714-DF18C048-D9D8-4D4A-B0F9-902C10838E05Q27676696-89EB415E-8BB8-434B-9440-FEF19BCE64A8Q27677388-8AA63B41-BE0D-4FC1-AE02-9A6967A65086Q27678910-31FC63E4-0786-4A3C-ACA3-7A6EB7F0BC98Q27681182-4190C72D-7CEE-4B00-B2F8-00F792A47912Q27681249-4F6D255D-CFEF-4CA7-96C3-B26AB5C6940FQ27711465-D33977A1-157F-473F-93CF-C7B3FECCC126Q30352716-0D9AB5D4-2065-493C-B731-12D5CC15BC4EQ30357564-69AB3740-E735-43A2-BEA6-AC6F07A29938Q30361544-12C9DCC4-CB20-45F3-9A61-843CE960A219Q30378910-9EEF1E0F-86C0-47A0-BB9B-A5F04BFFFB34Q30394410-C9280D3B-EA51-4A41-B646-74999C92C6A9Q30396922-9E0F3F5E-7B1D-4059-99B4-D64F7A4ED0A6Q30417724-C6B4F332-E132-4221-826C-34C3B92E615EQ30491157-8AEDBE90-88E1-416D-A337-C115E060C399Q31003157-ECD0DF94-82B1-438A-B360-7C21C6F52CA3Q31158106-00D2FEB7-2BFA-44A2-9803-529EB4E5E632Q33713877-D4CA8CC5-5672-44B8-AB60-685B954B4044Q33739670-F0D0DA08-9411-4A42-8C56-9B70D638FC9AQ33902457-47900609-0601-46E4-8755-B3D6D47E97DDQ34019423-AA3F515D-DA4C-4D88-8316-DCAB0BF68DA7Q34561962-358A98DC-665D-4E9D-A058-6B21CDBC6148Q35129020-6B6F821B-DDC1-48BB-8B03-339A29119AB5Q35529996-46DA256E-1065-4F68-8C44-A77CB6529480Q36066618-5165E25C-4DE8-48D8-8742-06AE1226C5F4Q36472761-5EF7CC53-E440-4195-A70F-4D1ABFED3679Q36870684-15C7F472-9C6E-4DB8-B855-BA4F20A1680FQ39321052-F9ED0943-C1CC-4974-B64A-37DBDFEF5E31Q40522418-4672F18E-945B-43E6-BF75-CBBE756817EAQ40616206-90637B3D-E1B7-4ED8-9B13-A5F3406057BEQ44208009-9A8B5E0D-5EA0-4680-87AD-E79CEF5F7654Q46085523-F1D42A4A-AE51-4384-B455-786904995F69Q48311698-4A036964-6A94-48B0-9140-F18E13412747
P2860
Comparison of protein solution structures refined by molecular dynamics simulation in vacuum, with a generalized Born model, and with explicit water.
description
2002 nî lūn-bûn
@nan
2002 թուականի Ապրիլին հրատարակուած գիտական յօդուած
@hyw
2002 թվականի ապրիլին հրատարակված գիտական հոդված
@hy
2002年の論文
@ja
2002年論文
@yue
2002年論文
@zh-hant
2002年論文
@zh-hk
2002年論文
@zh-mo
2002年論文
@zh-tw
2002年论文
@wuu
name
Comparison of protein solution ...... odel, and with explicit water.
@ast
Comparison of protein solution ...... odel, and with explicit water.
@en
type
label
Comparison of protein solution ...... odel, and with explicit water.
@ast
Comparison of protein solution ...... odel, and with explicit water.
@en
prefLabel
Comparison of protein solution ...... odel, and with explicit water.
@ast
Comparison of protein solution ...... odel, and with explicit water.
@en
P2093
P356
P1476
Comparison of protein solution ...... odel, and with explicit water.
@en
P2093
David A Case
Vickie Tsui
P2888
P304
P356
10.1023/A:1014929925008
P577
2002-04-01T00:00:00Z
P6179
1037058909