Next generation simulation tools: the Systems Biology Workbench and BioSPICE integration. - Wikidata - awgldk - TriplyDB

Next generation simulation tools: the Systems Biology Workbench and BioSPICE integration.

Next generation simulation tools: the Systems Biology Workbench and BioSPICE integration.

http://www.wikidata.org/entity/Q33196105

about

Rule-based cell systems model of aging using feedback loop motifs mediated by stress responses Computational modelling of the receptor-tyrosine-kinase-activated MAPK pathway Bioinformatics and systems biology of the lipidome Design and implementation of three incoherent feed-forward motif based biological concentration sensors A two-way interface between limited Systems Biology Markup Language and R Transition to quorum sensing in an Agrobacterium population: A stochastic model Visualizing genome and systems biology: technologies, tools, implementation techniques and trends, past, present and future A computational model predicting disruption of blood vessel development SBMLsqueezer: A CellDesigner plug-in to generate kinetic rate equations for biochemical networks The BioPAX community standard for pathway data sharing Mathematical and computational modeling in biology at multiple scales BioModels: Content, Features, Functionality, and Use PathCase-SB: integrating data sources and providing tools for systems biology research Consistent design schematics for biological systems: standardization of representation in biological engineering Increased glycolytic flux as an outcome of whole-genome duplication in yeast Bioactive Nutrients and Nutrigenomics in Age-Related Diseases.Robustness portraits of diverse biological networks conserved despite order-of-magnitude parameter uncertainty.A systems analysis of importin-{alpha}-{beta} mediated nuclear protein import The adapter importin-alpha provides flexible control of nuclear import at the expense of efficiency.Integrated network reconstruction, visualization and analysis using YANAsquare.TinkerCell: modular CAD tool for synthetic biology.CytoModeler: a tool for bridging large-scale network analysis and dynamic quantitative modeling On an infrastructure to support sharing and aggregating pre- and post-publication systems biology research data.SBMLeditor: effective creation of models in the Systems Biology Markup language (SBML)Resources for integrative systems biology: from data through databases to networks and dynamic system models.Developing complex signaling models using GENESIS/Kinetikit.Transcriptional dynamics of the embryonic stem cell switch.Modeling biochemical transformation processes and information processing with Narrator BioPP: a tool for web-publication of biological networks The Systems Biology Research Tool: evolvable open-source software Standards and ontologies in computational systems biology.Computational modeling of the hematopoietic erythroid-myeloid switch reveals insights into cooperativity, priming, and irreversibility A modeling-derived hypothesis on chronicity in respiratory diseases: desensitized pathogen recognition secondary to hyperactive IRAK/TRAF6 signaling.Onset dynamics of type A botulinum neurotoxin-induced paralysis.CADLIVE dynamic simulator: direct link of biochemical networks to dynamic models.An empirical strategy for characterizing bacterial proteomes across species in the absence of genomic sequences.FASIMU: flexible software for flux-balance computation series in large metabolic networks.MEMOSys: Bioinformatics platform for genome-scale metabolic models Kinetic modeling of biological systems.Modeling biology spanning different scales: an open challenge.

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P2860

Next generation simulation tools: the Systems Biology Workbench and BioSPICE integration.

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2003 nî lūn-bûn

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2003 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2003 թվականի հունվարին հրատարակված գիտական հոդված

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2003年の論文

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2003年論文

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2003年論文

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2003年論文

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2003年論文

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2003年論文

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2003年论文

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Next generation simulation tools: the Systems Biology Workbench and BioSPICE integration.

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Next generation simulation tools: the Systems Biology Workbench and BioSPICE integration.

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Next generation simulation tools: the Systems Biology Workbench and BioSPICE integration.

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Next generation simulation tools: the Systems Biology Workbench and BioSPICE integration.

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OMICS: A Journal of Integrative Biology

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Next generation simulation tools: the Systems Biology Workbench and BioSPICE integration.

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Andrew Finney

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Cameron Wellock

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Hamid Bolouri

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Herbert M Sauro

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Hiroaki Kitano

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John Doyle

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355-372

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