Query3d: a new method for high-throughput analysis of functional residues in protein structures.
about
Quantitative comparison of catalytic mechanisms and overall reactions in convergently evolved enzymes: implications for classification of enzyme functionSearching the protein structure database for ligand-binding site similarities using CPASS v.2FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structuresModular architecture of nucleotide-binding pockets.Analysis of substructural variation in families of enzymatic proteins with applications to protein function prediction.Phosphate binding sites identification in protein structures.Phosfinder: a web server for the identification of phosphate-binding sites on protein structuresPocketAnnotate: towards site-based function annotation.Catalytic site identification--a web server to identify catalytic site structural matches throughout PDB.Structural motifs recurring in different folds recognize the same ligand fragmentsLocal comparison of protein structures highlights cases of convergent evolution in analogous functional sites3dLOGO: a web server for the identification, analysis and use of conserved protein substructures.Spatial chemical conservation of hot spot interactions in protein-protein complexes.Superpose3D: a local structural comparison program that allows for user-defined structure representations.CMASA: an accurate algorithm for detecting local protein structural similarity and its application to enzyme catalytic site annotation.The LabelHash algorithm for substructure matching.Identification of binding pockets in protein structures using a knowledge-based potential derived from local structural similarities.Identification of nucleotide-binding sites in protein structures: a novel approach based on nucleotide modularityRapid catalytic template searching as an enzyme function prediction procedure.Proteins comparison through probabilistic optimal structure local alignmentA simple extension to the CMASA method for the prediction of catalytic residues in the presence of single point mutations.Phospho3D: a database of three-dimensional structures of protein phosphorylation sites.Clustering protein environments for function prediction: finding PROSITE motifs in 3DCofactor-binding sites in proteins of deviating sequence: comparative analysis and clustering in torsion angle, cavity, and fold space.Overview of BITS2005, the Second Annual Meeting of the Italian Bioinformatics Society.Structure-based classification of FAD binding sites: A comparative study of structural alignment tools.Sequence-based prediction of physicochemical interactions at protein functional sites using a function-and-interaction-annotated domain profile database.
P2860
Q28473198-6543D861-B116-45B1-8E6D-2BAB385829B4Q28741948-23E4761B-37E7-4442-B1F3-FB4B6A505539Q29048152-901BD486-9525-4FB5-B7FF-E10913FB8AEDQ30386066-DB9C6B4A-664B-41BC-9C1C-136A973EE21FQ30389018-481C9D99-31C2-4302-B288-D8E95281270EQ30395251-C62E4EAC-62BC-4B08-A2B4-F1DC441F5F38Q30403241-84BBA51B-6F19-4D86-8E2A-9F9A9B5E217CQ30417121-89DC797C-F5F8-41D1-A8EF-BA1F5762F278Q30430641-5CD72332-567D-4C5E-8440-A1F7A1D54186Q30488546-D9A6B362-777E-4F0E-A40F-E712F8E73BF5Q33281942-11611642-263E-4996-979B-888BAA6F3ABFQ33284088-E182421D-4002-4789-9AAF-10D556D46972Q33302062-49C49A84-6523-439A-B6E5-46957B50C28FQ33654264-3F61573B-73B6-47AF-9300-57A471CE51BDQ33675586-40811613-1B70-4A9C-A2A0-49A04D01AF1EQ33744489-F9D2E1A1-4C16-4693-A10F-21FF6162AEBDQ34247981-7A4F51BC-E24B-4619-BE4D-4008CD9890ACQ34500048-65B1FDDE-A4F9-4E78-B847-FFD426328149Q34722623-AED42155-5BED-4A2D-9CA4-912A5AD35C1FQ35257485-9CF26FC9-669B-4187-830C-EBB4B4454435Q35288385-7F9F91F2-F855-4D3E-86A4-66964C7D378AQ40104514-15C5A1E9-15E8-43F5-8E30-8D170D6083CFQ42004186-1546183E-72C7-4205-A032-5B219FFD5B67Q42625526-8869DB60-FA08-47A0-9C3A-1CE71EBF9071Q45980473-4C5DB161-C594-4AB8-83D5-627AFFE5708CQ51540257-F547ABA8-588D-4A5C-AAB2-B5B07C1F27A4Q54982220-3CEEE826-B0A2-4B89-B831-82B4D714822A
P2860
Query3d: a new method for high-throughput analysis of functional residues in protein structures.
description
2005 nî lūn-bûn
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2005 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի դեկտեմբերին հրատարակված գիտական հոդված
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2005年の論文
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2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
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2005年论文
@wuu
name
Query3d: a new method for high ...... esidues in protein structures.
@ast
Query3d: a new method for high ...... esidues in protein structures.
@en
type
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Query3d: a new method for high ...... esidues in protein structures.
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Query3d: a new method for high ...... esidues in protein structures.
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Query3d: a new method for high ...... esidues in protein structures.
@ast
Query3d: a new method for high ...... esidues in protein structures.
@en
P2860
P1433
P1476
Query3d: a new method for high ...... esidues in protein structures.
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P2093
Allegra Via
P2860
P2888
P356
10.1186/1471-2105-6-S4-S5
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P577
2005-12-01T00:00:00Z