FIRMA: a method for detection of alternative splicing from exon array data
about
The functional landscape of Hsp27 reveals new cellular processes such as DNA repair and alternative splicing and proposes novel anticancer targetsTIN: An R Package for Transcriptome Instability AnalysisGenetic correction of human induced pluripotent stem cells from patients with spinal muscular atrophy.Human phosphodiesterase 4D7 (PDE4D7) expression is increased in TMPRSS2-ERG-positive primary prostate cancer and independently adds to a reduced risk of post-surgical disease progressionExon-specific QTLs skew the inferred distribution of expression QTLs detected using gene expression array dataMyocardial alternative RNA splicing and gene expression profiling in early stage hypoplastic left heart syndromeThe dietary isothiocyanate sulforaphane modulates gene expression and alternative gene splicing in a PTEN null preclinical murine model of prostate cancer.Integrated genomic analysis of triple-negative breast cancers reveals novel microRNAs associated with clinical and molecular phenotypes and sheds light on the pathways they controlGene expression and isoform variation analysis using Affymetrix Exon Arrays.Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.Exon array analysis of head and neck cancers identifies a hypoxia related splice variant of LAMA3 associated with a poor prognosisAnalyzing alternative splicing data of splice junction arrays from Parkinson patients' leukocytes before and after deep brain stimulation as compared with control donorsGenome-wide analysis of alternative splicing during dendritic cell response to a bacterial challenge.easyExon--a Java-based GUI tool for processing and visualization of Affymetrix exon array data.Identifying differential exon splicing using linear models and correlation coefficients.Differential splicing using whole-transcript microarrays.Alternative splicing in the differentiation of human embryonic stem cells into cardiac precursors.MMBGX: a method for estimating expression at the isoform level and detecting differential splicing using whole-transcript Affymetrix arraysAltAnalyze and DomainGraph: analyzing and visualizing exon expression dataUbiquitination of hnRNPA1 by TRAF6 links chronic innate immune signaling with myelodysplasia.Chromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome.A random effects model for the identification of differential splicing (REIDS) using exon and HTA arraysThe comparison of different pre- and post-analysis filters for determination of exon-level alternative splicing events using Affymetrix arrays.Improvements to previous algorithms to predict gene structure and isoform concentrations using Affymetrix Exon arrays.A molecular inversion probe assay for detecting alternative splicingSupport vector machines-based identification of alternative splicing in Arabidopsis thaliana from whole-genome tiling arraysExon array data analysis using Affymetrix power tools and R statistical software.Transcriptome instability in colorectal cancer identified by exon microarray analyses: Associations with splicing factor expression levels and patient survival.Exon-level microarray analyses identify alternative splicing programs in breast cancer.Transcriptome instability as a molecular pan-cancer characteristic of carcinomasAlternative transcript initiation and splicing as a response to DNA damage.BEAT: Bioinformatics Exon Array Tool to store, analyze and visualize Affymetrix GeneChip Human Exon Array data from disease experimentsDetecting differential usage of exons from RNA-seq dataGene expression profile alone is inadequate in predicting complete response in multiple myeloma.Identification and characterization of alternative exon usage linked glioblastoma multiforme survivalpuma 3.0: improved uncertainty propagation methods for gene and transcript expression analysis.Incorporating alternative splicing and mRNA editing into the genetic analysis of complex traits.Deep brain stimulation modulates nonsense-mediated RNA decay in Parkinson's patients leukocytesSuppression of lung adenocarcinoma progression by Nkx2-1Computational detection of alternative exon usage.
P2860
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P2860
FIRMA: a method for detection of alternative splicing from exon array data
description
2008 nî lūn-bûn
@nan
2008 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2008 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
name
FIRMA: a method for detection of alternative splicing from exon array data
@ast
FIRMA: a method for detection of alternative splicing from exon array data
@en
type
label
FIRMA: a method for detection of alternative splicing from exon array data
@ast
FIRMA: a method for detection of alternative splicing from exon array data
@en
prefLabel
FIRMA: a method for detection of alternative splicing from exon array data
@ast
FIRMA: a method for detection of alternative splicing from exon array data
@en
P2093
P2860
P356
P1433
P1476
FIRMA: a method for detection of alternative splicing from exon array data
@en
P2093
J G Conboy
K M Simpson
M D Robinson
P2860
P304
P356
10.1093/BIOINFORMATICS/BTN284
P407
P50
P577
2008-06-23T00:00:00Z