MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis. - Wikidata - awgldk - TriplyDB

MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis.

MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis.

http://www.wikidata.org/entity/Q33354808

about

A transcriptome analysis identifies molecular effectors of unconjugated bilirubin in human neuroblastoma SH-SY5Y cells c-Myc is a universal amplifier of expressed genes in lymphocytes and embryonic stem cells Oocyte-specific linker histone H1foo is an epigenomic modulator that decondenses chromatin and impairs pluripotency Uptake of dietary milk miRNAs by adult humans: a validation study Gene ARMADA: an integrated multi-analysis platform for microarray data implemented in MATLAB.Members of the LATERAL ORGAN BOUNDARIES DOMAIN transcription factor family are involved in the regulation of secondary growth in Populus.BIG LEAF is a regulator of organ size and adventitious root formation in poplar.Widely targeted metabolomics based on large-scale MS/MS data for elucidating metabolite accumulation patterns in plants.PreP+07: improvements of a user friendly tool to preprocess and analyse microarray data.The derivation of diagnostic markers of chronic myeloid leukemia progression from microarray data.shinyheatmap: Ultra fast low memory heatmap web interface for big data genomics WebGimm: An integrated web-based platform for cluster analysis, functional analysis, and interactive visualization of results.Genome-Wide Identification and Analysis of Genes, Conserved between japonica and indica Rice Cultivars, that Respond to Low-Temperature Stress at the Vegetative Growth Stage.Embryonic miRNA profiles of normal and ectopic pregnancies.N-glycoproteome of E14.Tg2a mouse embryonic stem cells Microarray analyses of glucocorticoid and vitamin D3 target genes in differentiating cultured human podocytes Oral neutrophil transcriptome changes result in a pro-survival phenotype in periodontal diseases Transcriptomic Analysis for Different Sex Types of Ricinus communis L. during Development from Apical Buds to Inflorescences by Digital Gene Expression Profiling.MicroScope: ChIP-seq and RNA-seq software analysis suite for gene expression heatmaps.Neutrophil transcriptional profile changes during transit from bone marrow to sites of inflammation Gain-of-function miRNA signature by mutant p53 associates with poor cancer outcome Heatmapper: web-enabled heat mapping for all Applications of Bayesian gene selection and classification with mixtures of generalized singular g-priors.Roles of gibberellin catabolism and signaling in growth and physiological response to drought and short-day photoperiods in Populus trees.The protein phosphatase 2C clade A protein OsPP2C51 positively regulates seed germination by directly inactivating OsbZIP10.Genome-wide analysis of basic helix-loop-helix (bHLH) transcription factors in Brachypodium distachyon.Lipopolysaccharide-Elicited TSLPR Expression Enriches a Functionally Discrete Subset of Human CD14+ CD1c+ Monocytes.Molecular mechanisms of D-cycloserine in facilitating fear extinction: insights from RNAseq.Population level analysis of evolved mutations underlying improvements in plant hemicellulose and cellulose fermentation by Clostridium phytofermentans.H2A O-GlcNAcylation at serine 40 functions genomic protection in association with acetylated H2AZ or γH2AX.Meta-expression analysis of unannotated genes in rice and approaches for network construction to suggest the probable roles.Quantitative trait locus mapping of Populus bark features and stem diameter.Genome-wide investigation and transcriptome analysis of the WRKY gene family in Gossypium.Nucleosomes of polyploid trophoblast giant cells mostly consist of histone variants and form a loose chromatin structure.Streamlined Tandem Mass Tag (SL-TMT) Protocol: An Efficient Strategy for Quantitative (Phospho)proteome Profiling Using Tandem Mass Tag-Synchronous Precursor Selection-MS3.Concentration-dependent protein loading of extracellular vesicles released by Histoplasma capsulatum after antibody treatment and its modulatory action upon macrophages.A Large Open Pangenome and a Small Core Genome for Giant Pandoraviruses

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P2860

MeV+R: using MeV as a graphical user interface for Bioconductor applications in microarray analysis.

http://www.wikidata.org/entity/Q33354808

description

2008 nî lūn-bûn

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2008 թուականի Յուլիսին հրատարակուած գիտական յօդուած

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2008 թվականի հուլիսին հրատարակված գիտական հոդված

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2008年の論文

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MeV+R: using MeV as a graphica ...... ations in microarray analysis.

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Raphael Gottardo

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Vu T Chu

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P2860

Bioconductor: open software development for computational biology and bioinformatics

Significance analysis of microarrays applied to the ionizing radiation response

Identifying biological themes within lists of genes with EASE

Cluster analysis and display of genome-wide expression patterns

Multiclass classification of microarray data with repeated measurements: application to cancer

Analysis of strain and regional variation in gene expression in mouse brain

Gene expression profiling predicts clinical outcome of breast cancer

Summaries of Affymetrix GeneChip probe level data

Molecular classification of cancer: class discovery and class prediction by gene expression monitoring

TM4: a free, open-source system for microarray data management and analysis

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7

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