Predicting human nucleosome occupancy from primary sequence. - Wikidata - awgldk - TriplyDB

Predicting human nucleosome occupancy from primary sequence.

Predicting human nucleosome occupancy from primary sequence.

http://www.wikidata.org/entity/Q33363096

about

Linking genome to epigenome BioTriangle: a web-accessible platform for generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions iNuc-PhysChem: a sequence-based predictor for identifying nucleosomes via physicochemical properties Nucleosome Repositioning: A Novel Mechanism for Nicotine- and Cocaine-Induced Epigenetic Changes Capitalizing on disaster: Establishing chromatin specificity behind the replication fork.Sequence-dependent DNA helical rise and nucleosome stability.Learning a weighted sequence model of the nucleosome core and linker yields more accurate predictions in Saccharomyces cerevisiae and Homo sapiens.Epigenetic silencing in Friedreich ataxia is associated with depletion of CTCF (CCCTC-binding factor) and antisense transcription Effects of Alu elements on global nucleosome positioning in the human genome.Nucleosome landscape and control of transcription in the human malaria parasite An evolutionarily biased distribution of miRNA sites toward regulatory genes with high promoter-driven intrinsic transcriptional noise Sequence-dependent histone variant positioning signatures The organization of nucleosomes around splice sites.Exploratory analysis of genomic segmentations with Segtools.Sequence-based classification using discriminatory motif feature selection.Contrasting chromatin organization of CpG islands and exons in the human genome.Evaluating genome-scale approaches to eukaryotic DNA replication.Prediction of nucleosome rotational positioning in yeast and human genomes based on sequence-dependent DNA anisotropy.Archaeal nucleosome positioning in vivo and in vitro is directed by primary sequence motifs Pre-replication complex proteins assemble at regions of low nucleosome occupancy within the Chinese hamster dihydrofolate reductase initiation zone From DNA sequence to transcriptional behaviour: a quantitative approach Inter-locus as well as intra-locus heterogeneity in LINE-1 promoter methylation in common human cancers suggests selective demethylation pressure at specific CpGs.DNA-Encoded Chromatin Structural Intron Boundary Signals Identify Conserved Genes with Common Function.Predicting nucleosome positioning based on geometrically transformed Tsallis entropy.Pse-in-One: a web server for generating various modes of pseudo components of DNA, RNA, and protein sequences.Epigenetic changes in fetal hypothalamic energy regulating pathways are associated with maternal undernutrition and twinning A genetic algorithm-based weighted ensemble method for predicting transposon-derived piRNAs Nucleosome positioning and gene regulation: advances through genomics.Changes in nucleosome position at transcriptional start sites of specific genes in Zea mays mediator of paramutation1 mutants Hierarchical regulation of the genome: global changes in nucleosome organization potentiate genome response.Whole-genome sequencing in autism identifies hot spots for de novo germline mutation.Comprehensive nucleosome mapping of the human genome in cancer progression.Ride the wavelet: A multiscale analysis of genomic contexts flanking small insertions and deletions.Heterogeneous tempo and mode of conserved noncoding sequence evolution among four mammalian orders.The spring-loaded genome: nucleosome redistributions are widespread, transient, and DNA-directed.Formaldehyde-assisted isolation of regulatory elements.Integrating alignment-based and alignment-free sequence similarity measures for biological sequence classification The impact of intragenic CpG content on gene expression.Characterization of transcription start sites of putative non-coding RNAs by multifaceted use of massively paralleled sequencer.The genomic distribution and local context of coincident SNPs in human and chimpanzee.

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P2860

Predicting human nucleosome occupancy from primary sequence.

http://www.wikidata.org/entity/Q33363096

description

2008 nî lūn-bûn

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2008 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2008 թվականի օգոստոսին հրատարակված գիտական հոդված

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2008年の論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年论文

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name

Predicting human nucleosome occupancy from primary sequence.

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Predicting human nucleosome occupancy from primary sequence.

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type

label

Predicting human nucleosome occupancy from primary sequence.

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Predicting human nucleosome occupancy from primary sequence.

@en

prefLabel

Predicting human nucleosome occupancy from primary sequence.

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Predicting human nucleosome occupancy from primary sequence.

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JOURNAL.PCBI.1000134

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PLOS Computational Biology

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Predicting human nucleosome occupancy from primary sequence.

@en

P2093

Jonathan Dennis

http://www.w3.org/2001/XMLSchema#string

Robert E Thurman

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Robert Kingston

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Shobhit Gupta

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P2860

GENCODE: producing a reference annotation for ENCODE

Crystal structure of the nucleosome core particle at 2.8 A resolution

A genomic code for nucleosome positioning

Global nucleosome occupancy in yeast

Single-nucleosome mapping of histone modifications in S. cerevisiae

The meaning and use of the area under a receiver operating characteristic (ROC) curve

Dynamic regulation of nucleosome positioning in the human genome

Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome

Alteration of nucleosome structure as a mechanism of transcriptional regulation

Characteristic low density and shear sensitivity of cross-linked chromatin containing polycomb complexes.

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10.1371/JOURNAL.PCBI.1000134

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8

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William S. Noble

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