Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE.
about
A molecular phylogeny of Hypnales (Bryophyta) inferred from ITS2 sequence-structure dataITS polymorphisms shed light on hybrid evolution in apomictic plants: a case study on the Ranunculus auricomus complexThe changing epitome of species identification - DNA barcodingCompensatory base changes in ITS2 secondary structures correlate with the biological species concept despite intragenomic variability in ITS2 sequences--a proof of conceptPhylogenetic reconstruction in the order Nymphaeales: ITS2 secondary structure analysis and in silico testing of maturase k (matK) as a potential marker for DNA bar codingPhylogenetic relationships in Myrceugenia (Myrtaceae) based on plastid and nuclear DNA sequencesCongruence of chloroplast- and nuclear-encoded DNA sequence variations used to assess species boundaries in the soil microalga Heterococcus (Stramenopiles, Xanthophyceae).Evaluating the Species Boundaries of Green Microalgae (Coccomyxa, Trebouxiophyceae, Chlorophyta) Using Integrative Taxonomy and DNA Barcoding with Further Implications for the Species Identification in Environmental SamplesA non-toxigenic but morphologically and phylogenetically distinct new species of Pseudo-nitzschia, P. sabit sp. nov. (Bacillariophyceae).Chodatodesmus australis sp. nov. (Scenedesmaceae, Chlorophyta) from Antarctica, with the emended description of the genus Chodatodesmus, and circumscription of Flechtneria rotunda gen. et sp. nov.Three novel species in the Pseudo-nitzschia pseudodelicatissima complex: P. batesiana sp. nov., P. lundholmiae sp. nov., and P. fukuyoi sp. nov. (Bacillariophyceae) from the Strait of Malacca, Malaysia.The genus Pseudo-nitzschia (Bacillariophyceae) in a temperate estuary with description of two new species: Pseudo-nitzschia plurisecta sp. nov. and Pseudo-nitzschia abrensis sp. nov.Tetraflagellochloris mauritanica gen. et sp. nov. (Chlorophyceae), a New Flagellated Alga from the Mauritanian Desert: Morphology, Ultrastructure, and Phylogenetic Framing.High diversity of Pseudo-nitzschia along the northern coast of Sarawak (Malaysian Borneo), with descriptions of P. bipertita sp. nov. and P. limii sp. nov. (Bacillariophyceae).Generalist dinoflagellate endosymbionts and host genotype diversity detected from mesophotic (67-100 m depths) coral Leptoseris.ITS2 secondary structure improves phylogeny estimation in a radiation of blue butterflies of the subgenus Agrodiaetus (Lepidoptera: Lycaenidae: Polyommatus ).Photoacclimatization by the coral Montastraea cavernosa in the mesophotic zone: light, food, and genetics.Including RNA secondary structures improves accuracy and robustness in reconstruction of phylogenetic treesQuantifying cryptic Symbiodinium diversity within Orbicella faveolata and Orbicella franksi at the Flower Garden Banks, Gulf of MexicoThe systematics of Zoochlorella revisited employing an integrative approach.R2R--software to speed the depiction of aesthetic consensus RNA secondary structuresCleaning up the 'Bigmessidae': molecular phylogeny of scleractinian corals from Faviidae, Merulinidae, Pectiniidae and Trachyphylliidae.Internal transcribed spacer 2 (nu ITS2 rRNA) sequence-structure phylogenetics: towards an automated reconstruction of the green algal tree of lifeMitochondrial and nuclear phylogenetic analysis with Sanger and next-generation sequencing shows that, in Área de Conservación Guanacaste, northwestern Costa Rica, the skipper butterfly named Urbanus belli (family Hesperiidae) comprises three morphoA close-up view on ITS2 evolution and speciation - a case study in the Ulvophyceae (Chlorophyta, Viridiplantae).Molecular characterization of 'Bhut Jolokia' the hottest chilli.Composition of epiphytic bacterial communities differs on petals and leaves.Molecular taxonomy of Dunaliella (Chlorophyceae), with a special focus on D. salina: ITS2 sequences revisited with an extensive geographical sampling.Variation in Symbiodinium ITS2 sequence assemblages among coral colonies.Internal transcribed spacer 1 secondary structure analysis reveals a common core throughout the anaerobic fungi (Neocallimastigomycota).Molecular phylogenetics and systematics of the bivalve family Ostreidae based on rRNA sequence-structure models and multilocus species tree.Phylogeny of Oedogoniales, Chaetophorales and Chaetopeltidales (Chlorophyceae): inferences from sequence-structure analysis of ITS2Environmental influences on the Indo-Pacific octocoral Isis hippuris Linnaeus 1758 (Alcyonacea: Isididae): genetic fixation or phenotypic plasticity?Widespread green algae Chlorella and Stichococcus exhibit polar-temperate and tropical-temperate biogeography.Numerical integration methods and layout improvements in the context of dynamic RNA visualization.A multi-locus approach to barcoding in the Anopheles strodei subgroup (Diptera: Culicidae).DNA Barcoding Green Microalgae Isolated from Neotropical Inland Waters.Assessing intragenomic variation of the internal transcribed spacer two: Adapting the Illumina metagenomics protocol.Molecular phylogeny of 21 tropical bamboo species reconstructed by integrating non-coding internal transcribed spacer (ITS1 and 2) sequences and their consensus secondary structure.ITS2 secondary structure for species circumscription: case study in southern African Strychnos L. (Loganiaceae).
P2860
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P2860
Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE.
description
2008 nî lūn-bûn
@nan
2008 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2008 թվականի հոտեմբերին հրատարակված գիտական հոդված
@hy
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
name
Synchronous visual analysis an ...... ucture alignments using 4SALE.
@ast
Synchronous visual analysis an ...... ucture alignments using 4SALE.
@en
type
label
Synchronous visual analysis an ...... ucture alignments using 4SALE.
@ast
Synchronous visual analysis an ...... ucture alignments using 4SALE.
@en
prefLabel
Synchronous visual analysis an ...... ucture alignments using 4SALE.
@ast
Synchronous visual analysis an ...... ucture alignments using 4SALE.
@en
P2093
P2860
P356
P1433
P1476
Synchronous visual analysis an ...... ucture alignments using 4SALE.
@en
P2093
Matthias Wolf
Philipp N Seibel
Tobias Müller
P2860
P2888
P356
10.1186/1756-0500-1-91
P577
2008-10-14T00:00:00Z
P5875
P6179
1027183056