Cross-mapping and the identification of editing sites in mature microRNAs in high-throughput sequencing libraries. - Wikidata - awgldk - TriplyDB

Cross-mapping and the identification of editing sites in mature microRNAs in high-throughput sequencing libraries.

Cross-mapping and the identification of editing sites in mature microRNAs in high-throughput sequencing libraries.

http://www.wikidata.org/entity/Q33522078

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New methods for next generation sequencing based microRNA expression profiling Computational Prediction of miRNA Genes from Small RNA Sequencing Data A-to-I RNA Editing: Current Knowledge Sources and Computational Approaches with Special Emphasis on Non-Coding RNA Molecules MicroRNAs and their isomiRs function cooperatively to target common biological pathways Profiling RNA editing in human tissues: towards the inosinome Atlas Conserved microRNA editing in mammalian evolution, development and disease Comprehensive analysis of human small RNA sequencing data provides insights into expression profiles and miRNA editing DREAM: a webserver for the identification of editing sites in mature miRNAs using deep sequencing data.Noncoding RNA: Current Deep Sequencing Data Analysis Approaches and Challenges.Deep sequencing reveals differential expression of microRNAs in favorable versus unfavorable neuroblastoma.Characterization of Epstein-Barr virus miRNAome in nasopharyngeal carcinoma by deep sequencing.The integrative analysis of microRNA and mRNA expression in mouse uterus under delayed implantation and activation Whole transcriptome analysis: what are we still missing?Analysis of microRNA expression in the prepubertal testis.Deep-sequencing of human Argonaute-associated small RNAs provides insight into miRNA sorting and reveals Argonaute association with RNA fragments of diverse origin.Tracking miRNA precursor metabolic products and processing sites through completely analyzing high-throughput sequencing data.Cross-mapping events in miRNAs reveal potential miRNA-mimics and evolutionary implications.Barcoding bias in high-throughput multiplex sequencing of miRNA.Structural and operational complexity of the Geobacter sulfurreducens genome.A comprehensive survey of 3' animal miRNA modification events and a possible role for 3' adenylation in modulating miRNA targeting effectiveness.Dynamic isomiR regulation in Drosophila development Detection of RNA editing events in human cells using high-throughput sequencing.Detecting miRNAs in deep-sequencing data: a software performance comparison and evaluation.Evidence of purifying selection and co-evolution at the fold-back arm of the novel precursor microRNA159 gene in Phalaenopsis Species (Orchidaceae).Experimental design, preprocessing, normalization and differential expression analysis of small RNA sequencing experiments.Elucidating the inosinome: global approaches to adenosine-to-inosine RNA editing.Revealing editing and SNPs of microRNAs in colon tissues by analyzing high-throughput sequencing profiles of small RNAs.Characterization of phosphorus-regulated miR399 and miR827 and their isomirs in barley under phosphorus-sufficient and phosphorus-deficient conditions bacterial infection drives the expression dynamics of microRNAs and their isomiRs.The extracellular RNA complement of Escherichia coli.Large-scale profiling of microRNAs for The Cancer Genome Atlas.Small RNA Sequencing Uncovers New miRNAs and moRNAs Differentially Expressed in Normal and Primary Myelofibrosis CD34+ Cells.New global analysis of the microRNA transcriptome of primary tumors and lymph node metastases of papillary thyroid cancer.Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing.Breast Cancer-Specific miR Signature Unique to Extracellular Vesicles Includes "microRNA-like" tRNA Fragments.Accurate detection for a wide range of mutation and editing sites of microRNAs from small RNA high-throughput sequencing profiles Illumina Sequencing Reveals Aberrant Expression of MicroRNAs and Their Variants in Whitefish (Coregonus lavaretus) Liver after Exposure to Microcystin-LR.Deep annotation of mouse iso-miR and iso-moR variation Systematic identification of edited microRNAs in the human brain Deep sequencing of RNA from immune cell-derived vesicles uncovers the selective incorporation of small non-coding RNA biotypes with potential regulatory functions.

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P2860

Cross-mapping and the identification of editing sites in mature microRNAs in high-throughput sequencing libraries.

http://www.wikidata.org/entity/Q33522078

description

2010 nî lūn-bûn

@nan

2010 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի հունվարին հրատարակված գիտական հոդված

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2010年の論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年论文

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name

Cross-mapping and the identifi ...... roughput sequencing libraries.

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type

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Cross-mapping and the identifi ...... roughput sequencing libraries.

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Cross-mapping and the identifi ...... roughput sequencing libraries.

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Cross-mapping and the identifi ...... roughput sequencing libraries.

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prefLabel

Cross-mapping and the identifi ...... roughput sequencing libraries.

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Cross-mapping and the identifi ...... roughput sequencing libraries.

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Cross-mapping and the identifi ...... roughput sequencing libraries.

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Genome Research

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Cross-mapping and the identifi ...... roughput sequencing libraries.

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Geoffrey J Faulkner

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Harukazu Suzuki

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Jun Kawai

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Mami Kishima

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Michiel J L de Hoon

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Mitsuoki Kawano

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Mutsumi Kanamori-Katayama

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Ryan J Taft

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Takehiro Hashimoto

http://www.w3.org/2001/XMLSchema#string

P2860

Initial sequencing and analysis of the human genome

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Mapping and quantifying mammalian transcriptomes by RNA-Seq

RNA editing of a miRNA precursor

Post-transcriptional regulation of microRNA expression

Modulation of microRNA processing and expression through RNA editing by ADAR deaminases

Selective blockade of microRNA processing by Lin28

Mouse let-7 miRNA populations exhibit RNA editing that is constrained in the 5'-seed/ cleavage/anchor regions and stabilize predicted mmu-let-7a:mRNA duplexes

Mapping short DNA sequencing reads and calling variants using mapping quality scores

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257-264

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10.1101/GR.095273.109

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2

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20

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Yoshihide Hayashizaki

John S. Mattick

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2010-01-05T00:00:00Z

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20051556

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