PathPred: an enzyme-catalyzed metabolic pathway prediction server - Wikidata - awgldk - TriplyDB

PathPred: an enzyme-catalyzed metabolic pathway prediction server

PathPred: an enzyme-catalyzed metabolic pathway prediction server

http://www.wikidata.org/entity/Q33569917

about

Genomic analysis of the hydrocarbon-producing, cellulolytic, endophytic fungus Ascocoryne sarcoides A review of metabolic and enzymatic engineering strategies for designing and optimizing performance of microbial cell factories MINEs: open access databases of computationally predicted enzyme promiscuity products for untargeted metabolomics Metabolic pathway reconstruction strategies for central metabolism and natural product biosynthesis Bridging the gap: a roadmap to breaking the biological design barrier enviPath--The environmental contaminant biotransformation pathway resource Cell-free metabolic engineering: biomanufacturing beyond the cell In silico enzymatic synthesis of a 400,000 compound biochemical database for nontargeted metabolomics Bioinformatics opportunities for identification and study of medicinal plants The University of Minnesota Pathway Prediction System: multi-level prediction and visualization Simultaneous prediction of enzyme orthologs from chemical transformation patterns for de novo metabolic pathway reconstruction Eawag-Soil in enviPath: a new resource for exploring regulatory pesticide soil biodegradation pathways and half-life data.Integration of bioinformatics to biodegradation.Metabolome-scale prediction of intermediate compounds in multistep metabolic pathways with a recursive supervised approach.MUCHA: multiple chemical alignment algorithm to identify building block substructures of orphan secondary metabolites.An in silico platform for the design of heterologous pathways in nonnative metabolite production MetaMapp: mapping and visualizing metabolomic data by integrating information from biochemical pathways and chemical and mass spectral similarity.CMPF: class-switching minimized pathfinding in metabolic networks.An efficient algorithm for de novo predictions of biochemical pathways between chemical compounds KCF-S: KEGG Chemical Function and Substructure for improved interpretability and prediction in chemical bioinformatics.Cyanobacteria as photosynthetic biocatalysts: a systems biology perspective.Genome Sequence Analysis of the Naphthenic Acid Degrading and Metal Resistant Bacterium Cupriavidus gilardii CR3.Systems-Wide Prediction of Enzyme Promiscuity Reveals a New Underground Alternative Route for Pyridoxal 5'-Phosphate Production in E. coli Use of the University of Minnesota Biocatalysis/Biodegradation Database for study of microbial degradation.Engineering antibiotic production and overcoming bacterial resistance.New developments in the trace analysis of organic water pollutants.Systems metabolic engineering of microorganisms for natural and non-natural chemicals.Predictions of enzymatic parameters: a mini-review with focus on enzymes for biofuel.Cometabolic degradation of organic wastewater micropollutants by activated sludge and sludge-inherent microorganisms.Applications of genome-scale metabolic network model in metabolic engineering.MRE: a web tool to suggest foreign enzymes for the biosynthesis pathway design with competing endogenous reactions in mind.Metabolome-scale de novo pathway reconstruction using regioisomer-sensitive graph alignments.Computational methods to identify metabolic sub-networks based on metabolomic profiles.Identification of metabolic pathways using pathfinding approaches: a systematic review.Bioinformatics for the synthetic biology of natural products: integrating across the Design-Build-Test cycle.Probiotics, gut microbiota, and their influence on host health and disease.AromaDeg, a novel database for phylogenomics of aerobic bacterial degradation of aromatics.ReactPRED: a tool to predict and analyze biochemical reactions.Boolean network model for GPR142 against Type 2 diabetes and relative dynamic change ratio analysis using systems and biological circuits approach.Supervised de novo reconstruction of metabolic pathways from metabolome-scale compound sets.

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P2860

PathPred: an enzyme-catalyzed metabolic pathway prediction server

http://www.wikidata.org/entity/Q33569917

description

2010 nî lūn-bûn

@nan

2010 թուականի Ապրիլին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի ապրիլին հրատարակված գիտական հոդված

@hy

2010年の論文

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2010年論文

@yue

2010年論文

@zh-hant

2010年論文

@zh-hk

2010年論文

@zh-mo

2010年論文

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2010年论文

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name

PathPred: an enzyme-catalyzed metabolic pathway prediction server

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PathPred: an enzyme-catalyzed metabolic pathway prediction server

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PathPred: an enzyme-catalyzed metabolic pathway prediction server.

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type

label

PathPred: an enzyme-catalyzed metabolic pathway prediction server

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PathPred: an enzyme-catalyzed metabolic pathway prediction server

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PathPred: an enzyme-catalyzed metabolic pathway prediction server.

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prefLabel

PathPred: an enzyme-catalyzed metabolic pathway prediction server

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PathPred: an enzyme-catalyzed metabolic pathway prediction server

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PathPred: an enzyme-catalyzed metabolic pathway prediction server.

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Nucleic Acids Research

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PathPred: an enzyme-catalyzed metabolic pathway prediction server

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P2093

Daichi Shigemizu

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Masaaki Kotera

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Minoru Kanehisa

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Susumu Goto

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Toshiaki Tokimatsu

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P2860

KEGG for representation and analysis of molecular networks involving diseases and drugs

KAAS: an automatic genome annotation and pathway reconstruction server

Data-driven extraction of relative reasoning rules to limit combinatorial explosion in biodegradation pathway prediction.

The University of Minnesota Biocatalysis/Biodegradation Database: improving public access

Organizing and computing metabolic pathway data in terms of binary relations.

ExplorEnz: the primary source of the IUBMB enzyme list.

Computational assignment of the EC numbers for genomic-scale analysis of enzymatic reactions.

E-zyme: predicting potential EC numbers from the chemical transformation pattern of substrate-product pairs.

SIMCOMP/SUBCOMP: chemical structure search servers for network analyses

Development of a chemical structure comparison method for integrated analysis of chemical and genomic information in the metabolic pathways.

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Web Server issue

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38

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Masahiro Hattori

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2010-04-30T00:00:00Z

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43534675

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20435670

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2896155

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