Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci. - Wikidata - awgldk - TriplyDB

Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci.

Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci.

http://www.wikidata.org/entity/Q33597143

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4D nucleomes in single cells: what can computational modeling reveal about spatial chromatin conformation?Minor Loops in Major Folds: Enhancer-Promoter Looping, Chromatin Restructuring, and Their Association with Transcriptional Regulation and Disease On the demultiplexing of chromosome capture conformation data Tetrapod axial evolution and developmental constraints; Empirical underpinning by a mouse model Transcriptional response of Hoxb genes to retinoid signalling is regionally restricted along the neural tube rostrocaudal axis.Long noncoding RNAs: an emerging link between gene regulation and nuclear organization Clustering of mammalian Hox genes with other H3K27me3 targets within an active nuclear domain.MOZ and BMI1 play opposing roles during Hox gene activation in ES cells and in body segment identity specification in vivo.CTCF establishes discrete functional chromatin domains at the Hox clusters during differentiation.Differential chromosome conformations as hallmarks of cellular identity revealed by mathematical polymer modeling.Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders Determination of High-Resolution 3D Chromatin Organization Using Circular Chromosome Conformation Capture (4C-seq).Nanoscale spatial organization of the HoxD gene cluster in distinct transcriptional states.Collinear Hox-Hox interactions are involved in patterning the vertebrate anteroposterior (A-P) axis.The long noncoding RNA Gm15055 represses Hoxa gene expression by recruiting PRC2 to the gene cluster.The cohesin-associated protein Wapal is required for proper Polycomb-mediated gene silencing A role for HOX13 proteins in the regulatory switch between TADs at the HoxD locus Control of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscape.New insights in the clockwork mechanism regulating lineage specification: Lessons from the Drosophila nervous system.Chromosome dynamics and folding in eukaryotes: Insights from live cell microscopy.Hierarchical role for transcription factors and chromatin structure in genome organization along adipogenesis.Regulation of gene transcription by Polycomb proteins.Multi-scale chromatin state annotation using a hierarchical hidden Markov model.Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding The cohesin subunit Rad21 is a negative regulator of hematopoietic self-renewal through epigenetic repression of Hoxa7 and Hoxa9.Polycomb repressive complex PRC1 spatially constrains the mouse embryonic stem cell genome.Large scale genomic reorganization of topological domains at the HoxD locus.Embryonic timing, axial stem cells, chromatin dynamics, and the Hox clock.Physical Forces May Cause the HoxD Gene Cluster Elongation.Advances in Genomic Profiling and Analysis of 3D Chromatin Structure and Interaction.Spatial genome organization: contrasting views from chromosome conformation capture and fluorescence in situ hybridization.Hox Gene Collinearity: From A-P Patterning to Radially Symmetric Animals.SET1A/COMPASS and shadow enhancers in the regulation of homeotic gene expression.HOXA repression is mediated by nucleoporin Nup93 assisted by its interactors Nup188 and Nup205.Enhancer interaction networks as a means for singular olfactory receptor expression.Nuclear microenvironments modulate transcription from low-affinity enhancers.Poised for development.Parallel evolution of male germline epigenetic poising and somatic development in animals.Regulation of genome organization and gene expression by nuclear mechanotransduction.Transcriptional decomposition reveals active chromatin architectures and cell specific regulatory interactions.

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P2860

Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci.

http://www.wikidata.org/entity/Q33597143

description

2014 nî lūn-bûn

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2014 թուականի Ապրիլին հրատարակուած գիտական յօդուած

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2014 թվականի ապրիլին հրատարակված գիտական հոդված

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2014年の論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年论文

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name

Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci.

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Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci.

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type

label

Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci.

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Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci.

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prefLabel

Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci.

@ast

Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci.

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Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci.

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Elisabeth Joye

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Fabienne Chabaud

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Marion Leleu

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Patrick Schorderet

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P2860

Conservation and divergence of regulatory strategies at Hox Loci and the origin of tetrapod digits

Uncoupling time and space in the collinear regulation of Hox genes

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

Topological domains in mammalian genomes identified by analysis of chromatin interactions

Genome regulation by polycomb and trithorax proteins

Localized and transient transcription of Hox genes suggests a link between patterning and the segmentation clock

Cdx and Hox genes differentially regulate posterior axial growth in mammalian embryos

Mammalian polycomb-like Pcl2/Mtf2 is a novel regulatory component of PRC2 that can differentially modulate polycomb activity both at the Hox gene cluster and at Cdkn2a genes

Initiation, establishment and maintenance of Hox gene expression patterns in the mouse

HTSstation: a web application and open-access libraries for high-throughput sequencing data analysis

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10.7554/ELIFE.02557

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3

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Daan Noordermeer

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2014-04-29T00:00:00Z

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24843030

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