A comprehensive benchmark study of multiple sequence alignment methods: current challenges and future perspectives.
about
The dawn of open access to phylogenetic dataDECIPHER: harnessing local sequence context to improve protein multiple sequence alignmentComputational enzyme design approaches with significant biological outcomes: progress and challengesUse of ChIP-Seq data for the design of a multiple promoter-alignment methodInferring Orthologs: Open Questions and PerspectivesIndel reliability in indel-based phylogenetic inferenceMergeAlign: improving multiple sequence alignment performance by dynamic reconstruction of consensus multiple sequence alignmentsMACSE: Multiple Alignment of Coding SEquences accounting for frameshifts and stop codonsTopological characterization of neuronal arbor morphology via sequence representation: II--global alignment.DendroBLAST: approximate phylogenetic trees in the absence of multiple sequence alignments.Inferring Rates and Length-Distributions of Indels Using Approximate Bayesian Computation.Computational methods for Gene Orthology inferenceControversies in modern evolutionary biology: the imperative for error detection and quality controlDetecting remote sequence homology in disordered proteins: discovery of conserved motifs in the N-termini of Mononegavirales phosphoproteinsInferring phylogenies of evolving sequences without multiple sequence alignment.PhyloPhlAn is a new method for improved phylogenetic and taxonomic placement of microbesSequence evolution of the intrinsically disordered and globular domains of a model viral oncoprotein.A standard numbering scheme for thiamine diphosphate-dependent decarboxylases.The origins of the evolutionary signal used to predict protein-protein interactions.Identification of the Hevea brasiliensis AP2/ERF superfamily by RNA sequencingExpanding the Halohydrin Dehalogenase Enzyme Family: Identification of Novel Enzymes by Database Mining.Evaluating the accuracy and efficiency of multiple sequence alignment methods.Zebrafish as a model for apolipoprotein biology: comprehensive expression analysis and a role for ApoA-IV in regulating food intake.Efficient representation of uncertainty in multiple sequence alignments using directed acyclic graphs.Discovering co-occurring patterns and their biological significance in protein familiesPASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid SequencesRobust sequence alignment using evolutionary rates coupled with an amino acid substitution matrixGUIDANCE2: accurate detection of unreliable alignment regions accounting for the uncertainty of multiple parametersUltra-large alignments using phylogeny-aware profiles.Taxonomic status and origin of the Egyptian weasel (Mustela subpalmata) inferred from mitochondrial DNA.Ensembler: Enabling High-Throughput Molecular Simulations at the Superfamily ScaleLEON-BIS: multiple alignment evaluation of sequence neighbours using a Bayesian inference systemAdditive methods for genomic signaturesReading the Evolution of Compartmentalization in the Ribosome Assembly Toolbox: The YRG Protein Family.Improving transcriptome de novo assembly by using a reference genome of a related species: Translational genomics from oil palm to coconut.phylo-node: A molecular phylogenetic toolkit using Node.js.In silico discovery and modeling of non-coding RNA structure in viruses.Recombination in hepatitis C virusComparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations.IVisTMSA: Interactive Visual Tools for Multiple Sequence Alignments.
P2860
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P2860
A comprehensive benchmark study of multiple sequence alignment methods: current challenges and future perspectives.
description
2011 nî lūn-bûn
@nan
2011 թուականի Մարտին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի մարտին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
A comprehensive benchmark stud ...... enges and future perspectives.
@ast
A comprehensive benchmark stud ...... enges and future perspectives.
@en
type
label
A comprehensive benchmark stud ...... enges and future perspectives.
@ast
A comprehensive benchmark stud ...... enges and future perspectives.
@en
prefLabel
A comprehensive benchmark stud ...... enges and future perspectives.
@ast
A comprehensive benchmark stud ...... enges and future perspectives.
@en
P2093
P2860
P1433
P1476
A comprehensive benchmark stud ...... enges and future perspectives.
@en
P2093
Benjamin Linard
Julie D Thompson
Odile Lecompte
Olivier Poch
P2860
P304
P356
10.1371/JOURNAL.PONE.0018093
P407
P577
2011-03-31T00:00:00Z