Phased diploid genome assembly with single-molecule real-time sequencing. - Wikidata - awgldk - TriplyDB

Phased diploid genome assembly with single-molecule real-time sequencing.

Phased diploid genome assembly with single-molecule real-time sequencing.

http://www.wikidata.org/entity/Q33887832

about

De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data.Exploiting next-generation sequencing to solve the haplotyping puzzle in polyploids: a simulation study.Draft Nuclear Genome Sequence of the Liquid Hydrocarbon-Accumulating Green Microalga Botryococcus braunii Race B (Showa)Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter.Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly A high quality assembly of the Nile Tilapia (Oreochromis niloticus) genome reveals the structure of two sex determination regions Red blotch disease alters grape berry development and metabolism by interfering with the transcriptional and hormonal regulation of ripening Reduction in chromosome mobility accompanies nuclear organization during early embryogenesis in Caenorhabditis elegans.The dynamic three-dimensional organization of the diploid yeast genome.in silico Whole Genome Sequencer & Analyzer (iWGS): A Computational Pipeline to Guide the Design and Analysis of de novo Genome Sequencing Studies.Discovery and genotyping of structural variation from long-read haploid genome sequence data.SNP-Discovery by RAD-Sequencing in a Germplasm Collection of Wild and Cultivated Grapevines (V. vinifera L.).Direct determination of diploid genome sequences.Nanopore sequencing data analysis: state of the art, applications and challenges.Rapid de novo assembly of the European eel genome from nanopore sequencing reads.Strategies for optimizing BioNano and Dovetail explored through a second reference quality assembly for the legume model, Medicago truncatula.Whole Genome Sequence of the Heterozygous Clinical Isolate Candida krusei 81-B-5.De novo yeast genome assemblies from MinION, PacBio and MiSeq platforms.Genomic innovation for crop improvement.Recent advances in sequence assembly: principles and applications.HaploMerger2: rebuilding both haploid sub-assemblies from high-heterozygosity diploid genome assembly.A footprint of desiccation tolerance in the genome of Xerophyta viscosa.HINGE: long-read assembly achieves optimal repeat resolution.HySA: a Hybrid Structural variant Assembly approach using next-generation and single-molecule sequencing technologies.Fast and accurate de novo genome assembly from long uncorrected reads.Industrial Relevance of Chromosomal Copy Number Variation in Saccharomyces Yeasts.Genomics-enabled analysis of the emergent disease cotton bacterial blight.Harnessing Whole Genome Sequencing in Medical Mycology.Extraction of High Molecular Weight DNA from Fungal Rust Spores for Long Read Sequencing.Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome.Hybrid assembly with long and short reads improves discovery of gene family expansions.Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus.How Single Molecule Real-Time Sequencing and Haplotype Phasing Have Enabled Reference-Grade Diploid Genome Assembly of Wine Grapes.Building a locally diploid genome and transcriptome of the diatom Fragilariopsis cylindrus.De novo PacBio long-read and phased avian genome assemblies correct and add to reference genes generated with intermediate and short reads.LoRTE: Detecting transposon-induced genomic variants using low coverage PacBio long read sequences.MECAT: fast mapping, error correction, and de novo assembly for single-molecule sequencing reads.The Diversity, Structure, and Function of Heritable Adaptive Immunity Sequences in the Aedes aegypti Genome.

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Phased diploid genome assembly with single-molecule real-time sequencing.

http://www.wikidata.org/entity/Q33887832

description

2016 nî lūn-bûn

@nan

2016 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2016 թվականի հոտեմբերին հրատարակված գիտական հոդված

@hy

2016年の論文

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2016年論文

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2016年論文

@zh-hant

2016年論文

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2016年論文

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2016年論文

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2016年论文

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name

Phased diploid genome assembly with single-molecule real-time sequencing.

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Phased diploid genome assembly with single-molecule real-time sequencing.

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type

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Phased diploid genome assembly with single-molecule real-time sequencing.

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Phased diploid genome assembly with single-molecule real-time sequencing.

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prefLabel

Phased diploid genome assembly with single-molecule real-time sequencing.

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Phased diploid genome assembly with single-molecule real-time sequencing.

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Phased diploid genome assembly with single-molecule real-time sequencing

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Abraham Morales-Cruz

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Alicia Clum

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Chongyuan Luo

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David R Rank

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Gregory T Concepcion

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Maria Nattestad

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Massimo Delledonne

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Michael C Schatz

http://www.w3.org/2001/XMLSchema#string

Paul Peluso

http://www.w3.org/2001/XMLSchema#string

Ronan O'Malley

http://www.w3.org/2001/XMLSchema#string

P2860

The diploid genome sequence of an individual human

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

Chromosomal haplotypes by genetic phasing of human families

De novo assembly of human genomes with massively parallel short read sequencing

A global reference for human genetic variation

Life with 6000 genes

Gene prediction with a hidden Markov model and a new intron submodel

A whole-genome assembly of Drosophila

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

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1050-1054

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scholarly article

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10.1038/NMETH.4035

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12

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13

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Fritz Sedlazeck

Joseph R. Ecker

Christopher Dunn

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2016-10-17T00:00:00Z

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1019059120

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27749838

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