Whole-genome-based Mycobacterium tuberculosis surveillance: a standardized, portable, and expandable approach. - Wikidata - awgldk - TriplyDB

Whole-genome-based Mycobacterium tuberculosis surveillance: a standardized, portable, and expandable approach.

Whole-genome-based Mycobacterium tuberculosis surveillance: a standardized, portable, and expandable approach.

http://www.wikidata.org/entity/Q33900153

about

Culture-independent detection and characterisation of Mycobacterium tuberculosis and M. africanum in sputum samples using shotgun metagenomics on a benchtop sequencer Molecular Typing of Mycobacterium Tuberculosis Strains: A Fundamental Tool for Tuberculosis Control and Elimination Detection, Characterization, and Typing of Shiga Toxin-Producing Escherichia coli Consequences of genomic diversity in Mycobacterium tuberculosis A microbiological revolution meets an ancient disease: improving the management of tuberculosis with genomics Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis Molecular Strain Typing of Mycobacterium tuberculosis: a Review of Frequently Used Methods Methodological and Clinical Aspects of the Molecular Epidemiology of Mycobacterium tuberculosis and Other Mycobacteria Food Safety in the Age of Next Generation Sequencing, Bioinformatics, and Open Data Access.The Listeria monocytogenes Core-Genome Sequence Typer (LmCGST): a bioinformatic pipeline for molecular characterization with next-generation sequence data.Evaluation of an Optimal Epidemiological Typing Scheme for Legionella pneumophila with Whole-Genome Sequence Data Using Validation Guidelines.A joint cross-border investigation of a cluster of multidrug-resistant tuberculosis in Austria, Romania and Germany in 2014 using classic, genotyping and whole genome sequencing methods: lessons learnt.Lineage-specific SNPs for genotyping of Mycobacterium tuberculosis clinical isolates.Defining a Core Genome Multilocus Sequence Typing Scheme for the Global Epidemiology of Vibrio parahaemolyticus.Clonality and Resistome analysis of KPC-producing Klebsiella pneumoniae strain isolated in Korea using whole genome sequencing.Emerging rapid resistance testing methods for clinical microbiology laboratories and their potential impact on patient management.Multilocus sequence typing of Mycobacterium xenopi Genetic evolution of Mycobacterium bovis causing tuberculosis in livestock and wildlife in France since 1978.Refinement of whole-genome multilocus sequence typing analysis by addressing gene paralogy.Clonality and micro-diversity of a nationwide spreading genotype of Mycobacterium tuberculosis in Japan.Not seeing the forest for the trees: size of the minimum spanning trees (MSTs) forest and branch significance in MST-based phylogenetic analysis Artificially designed pathogens - a diagnostic option for future military deployments TGS-TB: Total Genotyping Solution for Mycobacterium tuberculosis Using Short-Read Whole-Genome Sequencing.Defining and Evaluating a Core Genome Multilocus Sequence Typing Scheme for Whole-Genome Sequence-Based Typing of Listeria monocytogenes.Characterization of Foodborne Outbreaks of Salmonella enterica Serovar Enteritidis with Whole-Genome Sequencing Single Nucleotide Polymorphism-Based Analysis for Surveillance and Outbreak Detection.High Interlaboratory Reproducibility and Accuracy of Next-Generation-Sequencing-Based Bacterial Genotyping in a Ring Trial.A Nonautochthonous U.S. Strain of Vibrio parahaemolyticus Isolated from Chesapeake Bay Oysters Caused the Outbreak in Maryland in 2010.Rapid Drug Susceptibility Testing of Drug-Resistant Mycobacterium tuberculosis Isolates Directly from Clinical Samples by Use of Amplicon Sequencing: a Proof-of-Concept Study.Whole-Genome Sequencing Analysis of Salmonella enterica Serovar Enteritidis Isolates in Chile Provides Insights into Possible Transmission between Gulls, Poultry, and Humans.Next-Generation Epidemiology: Using Real-Time Core Genome Multilocus Sequence Typing To Support Infection Control Policy.Whole-Genome Multilocus Sequence Typing of Extended-Spectrum-Beta-Lactamase-Producing Enterobacteriaceae Construction of a Pan-Genome Allele Database of Salmonella enterica Serovar Enteritidis for Molecular Subtyping and Disease Cluster Identification.Defining and Evaluating a Core Genome Multilocus Sequence Typing Scheme for Whole-Genome Sequence-Based Typing of Klebsiella pneumoniae.Bacterial genome sequencing in clinical microbiology: a pathogen-oriented review.Development and evaluation of a core genome multilocus typing scheme for whole-genome sequence-based typing of Acinetobacter baumannii A Primer on Infectious Disease Bacterial Genomics Challenges and opportunities for whole-genome sequencing-based surveillance of antibiotic resistance.Genomic and metagenomic technologies to explore the antibiotic resistance mobilome.A brief primer on genomic epidemiology: lessons learned from Mycobacterium tuberculosis.Real-Time Whole-Genome Sequencing for Surveillance of Listeria monocytogenes, France.

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Whole-genome-based Mycobacterium tuberculosis surveillance: a standardized, portable, and expandable approach.

http://www.wikidata.org/entity/Q33900153

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2014 nî lūn-bûn

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2014 թուականի Ապրիլին հրատարակուած գիտական յօդուած

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2014 թվականի ապրիլին հրատարակված գիտական հոդված

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2014年の論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年论文

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Whole-genome-based Mycobacteri ...... able, and expandable approach.

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Whole-genome-based Mycobacteri ...... able, and expandable approach.

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Whole-genome-based Mycobacteri ...... able, and expandable approach.

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Whole-genome-based Mycobacteri ...... able, and expandable approach.

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Whole-genome-based Mycobacteri ...... able, and expandable approach.

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Journal of Clinical Microbiology

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Whole-genome-based Mycobacteri ...... table, and expandable approach

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P2093

Dag Harmsen

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Jörg Rothgänger

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Karen Meywald Walter

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Matthias Merker

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Roland Diel

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Stefan Niemann

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Thomas Weniger

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P2860

Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology

Genomic diversity among drug sensitive and multidrug resistant isolates of Mycobacterium tuberculosis with identical DNA fingerprints

Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans

Whole genome sequencing versus traditional genotyping for investigation of a Mycobacterium tuberculosis outbreak: a longitudinal molecular epidemiological study

Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology

Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology

Whole-genome sequencing and social-network analysis of a tuberculosis outbreak

Global tuberculosis control: lessons learnt and future prospects.

Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study.

BIGSdb: Scalable analysis of bacterial genome variation at the population level.

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2479-2486

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10.1128/JCM.00567-14

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7

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52

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262025254

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24789177

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Mycobacterium tuberculosis

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4097744

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