Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics - Wikidata - awgldk - TriplyDB

Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics

Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics

http://www.wikidata.org/entity/Q33900751

about

Systems biology of the structural proteome Metabolic Network Modeling of Microbial Interactions in Natural and Engineered Environmental Systems Synthetic Ecology of Microbes: Mathematical Models and Applications From cultured to uncultured genome sequences: metagenomics and modeling microbial ecosystems Visualization of Metabolic Interaction Networks in Microbial Communities Using VisANT 5.0 Using Genome-scale Models to Predict Biological Capabilities Growth-altering microbial interactions are responsive to chemical context.Metabolic network modeling of microbial communities.SteadyCom: Predicting microbial abundances while ensuring community stability Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis.The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases.Mapping the inner workings of the microbiome: genomic- and metagenomic-based study of metabolism and metabolic interactions in the human microbiome.Ecological perspectives on synthetic biology: insights from microbial population biology.Systems-based approaches to unravel multi-species microbial community functioning.The demographic determinants of human microbiome health Spatially-resolved metabolic cooperativity within dense bacterial colonies.Systems biology of host-microbe metabolomics.Unraveling interactions in microbial communities - from co-cultures to microbiomes.Vaccination Drives Changes in Metabolic and Virulence Profiles of Streptococcus pneumoniae.An Economic Framework of Microbial Trade.MICROBIOME. Microbial growth dynamics and human disease.Transient dynamics of competitive exclusion in microbial communities.Pathway Tools version 19.0 update: software for pathway/genome informatics and systems biology Calibration and analysis of genome-based models for microbial ecology In silico substrate dependence increases community productivity but threatens biodiversity.Constrained Allocation Flux Balance Analysis Cell scale host-pathogen modeling: another branch in the evolution of constraint-based methods.Metabolic modeling of a chronic wound biofilm consortium predicts spatial partitioning of bacterial species.The impact of resource dependence of the mechanisms of life on the spatial population dynamics of an in silico microbial community.Microstencils to generate defined, multi-species patterns of bacteria.Identification of the potentiating mutations and synergistic epistasis that enabled the evolution of inter-species cooperation.Emergence of microbial diversity due to cross-feeding interactions in a spatial model of gut microbial metabolism.BacArena: Individual-based metabolic modeling of heterogeneous microbes in complex communities.Spatiotemporal modeling of microbial metabolism.Multiscale Model of Mycobacterium tuberculosis Infection Maps Metabolite and Gene Perturbations to Granuloma Sterilization Predictions An algorithm for designing minimal microbial communities with desired metabolic capacities.Metabolic modelling in a dynamic evolutionary framework predicts adaptive diversification of bacteria in a long-term evolution experiment.MMinte: an application for predicting metabolic interactions among the microbial species in a community.Challenges in microbial ecology: building predictive understanding of community function and dynamics.Parametric studies of metabolic cooperativity in Escherichia coli colonies: Strain and geometric confinement effects.

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Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics

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2014 թուականի Մայիսին հրատարակուած գիտական յօդուած

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2014年の論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年论文

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Metabolic resource allocation ...... eractions and spatial dynamics

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Metabolic resource allocation ...... eractions and spatial dynamics

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Alex H Lang

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Amrita Kar

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Brian R Granger

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Christopher J Marx

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Daniel Segrè

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Gracia Bonilla

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Ilija Dukovski

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Nicholas Leiby

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Pankaj Mehta

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William R Harcombe

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P2860

Environments that induce synthetic microbial ecosystems

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

Estimating prokaryotic diversity and its limits

Physics of chemoreception

Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction

Improvement of Escherichia coli production strains by modification of the phosphoenolpyruvate:sugar phosphotransferase system

Metabolic and demographic feedbacks shape the emergent spatial structure and function of microbial communities

Analysis of optimality in natural and perturbed metabolic networks

Diversity, stability and resilience of the human gut microbiota

What is flux balance analysis?

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1104-1115

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scholarly article

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10.1016/J.CELREP.2014.03.070

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