Illumina-based analysis of microbial community diversity. - Wikidata - awgldk - TriplyDB

Illumina-based analysis of microbial community diversity.

Illumina-based analysis of microbial community diversity.

http://www.wikidata.org/entity/Q33934016

about

Bacteria-human somatic cell lateral gene transfer is enriched in cancer samples New insights into the structure and function of phyllosphere microbiota through high-throughput molecular approaches An introduction to the analysis of shotgun metagenomic data A metabarcoding framework for facilitated survey of endolithic phototrophs with tufA Protistan community analysis: key findings of a large-scale molecular sampling.Diet is the primary determinant of bacterial community structure in the guts of higher termites Limited Bacterial Diversity within a Treatment Plant Receiving Antibiotic-Containing Waste from Bulk Drug Production Inferring correlation networks from genomic survey data Analysis of metagenomic data containing high biodiversity levels.Effects of Specimen Collection Methodologies and Storage Conditions on the Short-Term Stability of Oral Microbiome Taxonomy Ice cover extent drives phytoplankton and bacterial community structure in a large north-temperate lake: implications for a warming climate.Inferring neutral biodiversity parameters using environmental DNA data sets.Ecological coherence of diversity patterns derived from classical fingerprinting and Next Generation Sequencing techniques.Evaluation of the reproducibility of amplicon sequencing with Illumina MiSeq platform.Comparative analysis of microbial diversity in two hot springs of Bakreshwar, West Bengal, India.Analysis of plant microbe interactions in the era of next generation sequencing technologies.Soil bacterial quantification approaches coupling with relative abundances reflecting the changes of taxa.A comparative study revealed first insights into the diversity and metabolisms of the microbial communities in the sediments of Pacmanus and Desmos hydrothermal fields Modeling ecological drivers in marine viral communities using comparative metagenomics and network analyses.PANDAseq: paired-end assembler for illumina sequences.TUIT, a BLAST-based tool for taxonomic classification of nucleotide sequences.Distribution-based clustering: using ecology to refine the operational taxonomic unit.Soil bacterial diversity screening using single 16S rRNA gene V regions coupled with multi-million read generating sequencing technologies PEAR: a fast and accurate Illumina Paired-End reAd mergeR.A direct PCR approach to accelerate analyses of human-associated microbial communities Analysis of the cystic fibrosis lung microbiota via serial Illumina sequencing of bacterial 16S rRNA hypervariable regions.Improved pipeline for reducing erroneous identification by 16S rRNA sequences using the Illumina MiSeq platform.Effects of OTU clustering and PCR artifacts on microbial diversity estimates.Chapter 12: Human microbiome analysis Taxonomic classification of bacterial 16S rRNA genes using short sequencing reads: evaluation of effective study designs Short-read assembly of full-length 16S amplicons reveals bacterial diversity in subsurface sediments Species identification and profiling of complex microbial communities using shotgun Illumina sequencing of 16S rRNA amplicon sequences.High-throughput sequencing: a roadmap toward community ecology Phylogenetics and the human microbiome High-resolution taxonomic profiling of the subgingival microbiome for biomarker discovery and periodontitis diagnosis.Association of gut microbiota with post-operative clinical course in Crohn's disease.Stability of the gorilla microbiome despite simian immunodeficiency virus infection.Ultradeep 16S rRNA sequencing analysis of geographically similar but diverse unexplored marine samples reveal varied bacterial community composition Microbial community composition and diversity via 16S rRNA gene amplicons: evaluating the illumina platform.Analysis, optimization and verification of Illumina-generated 16S rRNA gene amplicon surveys.

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Illumina-based analysis of microbial community diversity.

http://www.wikidata.org/entity/Q33934016

description

2011 nî lūn-bûn

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2011 թուականի Յունիսին հրատարակուած գիտական յօդուած

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2011 թվականի հունիսին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

Illumina-based analysis of microbial community diversity.

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Illumina-based analysis of microbial community diversity.

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Illumina-based analysis of microbial community diversity.

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Illumina-based analysis of microbial community diversity.

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Illumina-based analysis of microbial community diversity.

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Illumina-based analysis of microbial community diversity.

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The ISME Journal

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Illumina-based analysis of microbial community diversity.

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Howard Ochman

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Patrick H Degnan

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P2860

Unlocking short read sequencing for metagenomics

Query-dependent banding (QDB) for faster RNA similarity searches

Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA

Mapping short DNA sequencing reads and calling variants using mapping quality scores

Microbial diversity in the deep sea and the underexplored "rare biosphere"

The complete genome sequence of Escherichia coli K-12

Evolution of mammals and their gut microbes

Bacterial community variation in human body habitats across space and time

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample.

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183-194

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10.1038/ISMEJ.2011.74

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1

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1012050464

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