Identification of the binding sites of regulatory proteins in bacterial genomes
about
Computational prediction of transcription-factor binding site locationsA genomic code for nucleosome positioningTRACTOR_DB: a database of regulatory networks in gamma-proteobacterial genomesBioinformatic identification of novel regulatory DNA sequence motifs in Streptomyces coelicolorGenome wide identification of regulatory motifs in Bacillus subtilisGenome-wide identification of the regulatory targets of a transcription factor using biochemical characterization and computational genomic analysisRegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditionsThe comprehensive updated regulatory network of Escherichia coli K-12.Programming cells: towards an automated 'Genetic Compiler'Defining the plasticity of transcription factor binding sites by Deconstructing DNA consensus sequences: the PhoP-binding sites among gamma/enterobacteria.Detection of prokaryotic promoters from the genomic distribution of hexanucleotide pairs.Determinants of cell- and gene-specific transcriptional regulation by the glucocorticoid receptor.Wide-scale analysis of human functional transcription factor binding reveals a strong bias towards the transcription start site.SIGffRid: a tool to search for sigma factor binding sites in bacterial genomes using comparative approach and biologically driven statistics.Predicted transcription factor binding sites as predictors of operons in Escherichia coli and Streptomyces coelicolor.Extracting regulator activity profiles by integration of de novo motifs and expression data: characterizing key regulators of nutrient depletion responses in Streptomyces coelicolor.A Gibbs sampler for identification of symmetrically structured, spaced DNA motifs with improved estimation of the signal length.Transcription-coupled changes to chromatin underpin gene silencing by transcriptional interference.Conservation of transcription factor binding events predicts gene expression across species.Predicting the impact of promoter variability on regulatory outputsLarge-scale computational and statistical analyses of high transcription potentialities in 32 prokaryotic genomes.Comparative genomic reconstruction of transcriptional regulatory networks in bacteria.Bioinformatics resources for the study of gene regulation in bacteriaGene promoter scan methodology for identifying and classifying coregulated promotersGenome-wide de novo prediction of cis-regulatory binding sites in prokaryotes.GADEM: a genetic algorithm guided formation of spaced dyads coupled with an EM algorithm for motif discovery.The Escherichia coli RutR transcription factor binds at targets within genes as well as intergenic regions.Adaptation to environmental factors shapes the organization of regulatory regions in microbial communities.Analysis of gene expression in operons of Streptomyces coelicolor.A motif co-occurrence approach for genome-wide prediction of transcription-factor-binding sites in Escherichia coli.Whole-genome discovery of transcription factor binding sites by network-level conservation.ArgR and AhrC are both required for regulation of arginine metabolism in Lactococcus lactisfolA, a new member of the TyrR regulon in Escherichia coli K-12.The identification of functional motifs in temporal gene expression analysis.Exact p-value calculation for heterotypic clusters of regulatory motifs and its application in computational annotation of cis-regulatory modulesComplex transcriptional control links NikABCDE-dependent nickel transport with hydrogenase expression in Escherichia coli.The cis-regulatory map of Shewanella genomes.PIDA:A new algorithm for pattern identification.Efficient Inference for Sparse Latent Variable Models of Transcriptional Regulation.Modular discovery of monomeric and dimeric transcription factor binding motifs for large data sets.
P2860
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P2860
Identification of the binding sites of regulatory proteins in bacterial genomes
description
2002 nî lūn-bûn
@nan
2002 թուականի Օգոստոսին հրատարակուած գիտական յօդուած
@hyw
2002 թվականի օգոստոսին հրատարակված գիտական հոդված
@hy
2002年の論文
@ja
2002年論文
@yue
2002年論文
@zh-hant
2002年論文
@zh-hk
2002年論文
@zh-mo
2002年論文
@zh-tw
2002年论文
@wuu
name
Identification of the binding sites of regulatory proteins in bacterial genomes
@ast
Identification of the binding sites of regulatory proteins in bacterial genomes
@en
Identification of the binding sites of regulatory proteins in bacterial genomes
@nl
type
label
Identification of the binding sites of regulatory proteins in bacterial genomes
@ast
Identification of the binding sites of regulatory proteins in bacterial genomes
@en
Identification of the binding sites of regulatory proteins in bacterial genomes
@nl
prefLabel
Identification of the binding sites of regulatory proteins in bacterial genomes
@ast
Identification of the binding sites of regulatory proteins in bacterial genomes
@en
Identification of the binding sites of regulatory proteins in bacterial genomes
@nl
P2093
P2860
P356
P1476
Identification of the binding sites of regulatory proteins in bacterial genomes
@en
P2093
Carol Gross
Eric D Siggia
Virgil Rhodius
P2860
P304
11772-11777
P356
10.1073/PNAS.112341999
P407
P577
2002-08-14T00:00:00Z