GemSIM: general, error-model based simulator of next-generation sequencing data.
about
HIVE-hexagon: high-performance, parallelized sequence alignment for next-generation sequencing data analysisMetagenomics: Retrospect and Prospects in High Throughput AgeBest practices for evaluating single nucleotide variant calling methods for microbial genomicsComputational meta'omics for microbial community studiesComputational methods for detecting copy number variations in cancer genome using next generation sequencing: principles and challengesSInC: an accurate and fast error-model based simulator for SNPs, Indels and CNVs coupled with a read generator for short-read sequence dataStrain-specific parallel evolution drives short-term diversification during Pseudomonas aeruginosa biofilm formationParametric modeling of whole-genome sequencing data for CNV identification.FASTQSim: platform-independent data characterization and in silico read generation for NGS datasets.A simple data-adaptive probabilistic variant calling model.SoloDel: a probabilistic model for detecting low-frequent somatic deletions from unmatched sequencing data.International interlaboratory study comparing single organism 16S rRNA gene sequencing data: Beyond consensus sequence comparisonsA comparison of tools for the simulation of genomic next-generation sequencing data.MapReduce for accurate error correction of next-generation sequencing data.De novo transcriptome assembly facilitates characterisation of fast-evolving gene families, MHC class I in the bank vole (Myodes glareolus).Virmid: accurate detection of somatic mutations with sample impurity inferenceFOCUS: an alignment-free model to identify organisms in metagenomes using non-negative least squaresCASPER: context-aware scheme for paired-end reads from high-throughput amplicon sequencing.Combining de novo and reference-guided assembly with scaffold_builder.Reconstruction of ribosomal RNA genes from metagenomic data.XS: a FASTQ read simulator.Empirical assessment of sequencing errors for high throughput pyrosequencing data.Routine performance and errors of 454 HLA exon sequencing in diagnostics.Evaluating genome architecture of a complex region via generalized bipartite matchingBenchmarking short sequence mapping toolsAccurate single nucleotide variant detection in viral populations by combining probabilistic clustering with a statistical test of strand biasReconstructing the genomic content of microbiome taxa through shotgun metagenomic deconvolution.Short barcodes for next generation sequencingTASSEL-GBS: a high capacity genotyping by sequencing analysis pipeline.A better sequence-read simulator program for metagenomicsEvaluation of viral genome assembly and diversity estimation in deep metagenomes.PERGA: a paired-end read guided de novo assembler for extending contigs using SVM and look ahead approach.Frequency-based haplotype reconstruction from deep sequencing data of bacterial populations.High-Throughput, Amplicon-Based Sequencing of the CREBBP Gene as a Tool to Develop a Universal Platform-Independent AssayPotential and pitfalls of eukaryotic metagenome skimming: a test case for lichens.cFinder: definition and quantification of multiple haplotypes in a mixed sample.Hybrid de novo tandem repeat detection using short and long reads.misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads.High-Specificity Targeted Functional Profiling in Microbial Communities with ShortBRED.Contig-Layout-Authenticator (CLA): A Combinatorial Approach to Ordering and Scaffolding of Bacterial Contigs for Comparative Genomics and Molecular Epidemiology
P2860
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P2860
GemSIM: general, error-model based simulator of next-generation sequencing data.
description
2012 nî lūn-bûn
@nan
2012 թուականի Փետրուարին հրատարակուած գիտական յօդուած
@hyw
2012 թվականի փետրվարին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
GemSIM: general, error-model based simulator of next-generation sequencing data.
@ast
GemSIM: general, error-model based simulator of next-generation sequencing data.
@en
GemSIM: general, error-model based simulator of next-generation sequencing data.
@nl
type
label
GemSIM: general, error-model based simulator of next-generation sequencing data.
@ast
GemSIM: general, error-model based simulator of next-generation sequencing data.
@en
GemSIM: general, error-model based simulator of next-generation sequencing data.
@nl
prefLabel
GemSIM: general, error-model based simulator of next-generation sequencing data.
@ast
GemSIM: general, error-model based simulator of next-generation sequencing data.
@en
GemSIM: general, error-model based simulator of next-generation sequencing data.
@nl
P2860
P356
P1433
P1476
GemSIM: general, error-model based simulator of next-generation sequencing data.
@en
P2093
Kerensa E McElroy
Torsten Thomas
P2860
P356
10.1186/1471-2164-13-74
P407
P577
2012-02-15T00:00:00Z