ASTRO-FOLD: a combinatorial and global optimization framework for Ab initio prediction of three-dimensional structures of proteins from the amino acid sequence.
about
Nucleic acid chaperons: a theory of an RNA-assisted protein foldingAutomated protein structure modeling in CASP9 by I-TASSER pipeline combined with QUARK-based ab initio folding and FG-MD-based structure refinementThe protein folding problemASTRO-FOLD 2.0: an Enhanced Framework for Protein Structure PredictionForcefield_PTM:Ab InitioCharge and AMBER Forcefield Parameters for Frequently Occurring Post-Translational ModificationsAmino acid size, charge, hydropathy indices and matrices for protein structure analysis.Princeton_TIGRESS: protein geometry refinement using simulations and support vector machines.Protein folding and de novo protein design for biotechnological applicationsAnalysis of dihedral angle preferences for alanine and glycine residues in alpha and beta transmembrane regions.A comparative study of the reported performance of ab initio protein structure prediction algorithms.Towards accurate residue-residue hydrophobic contact prediction for alpha helical proteins via integer linear optimizationProtein contact prediction by integrating joint evolutionary coupling analysis and supervised learning.Selecting high quality protein structures from diverse conformational ensembles.Predicting dihedral angle probability distributions for protein coil residues from primary sequence using neural networksCOMSAT: Residue contact prediction of transmembrane proteins based on support vector machines and mixed integer linear programming.Contact prediction for beta and alpha-beta proteins using integer linear optimization and its impact on the first principles 3D structure prediction method ASTRO-FOLD.An improved hybrid global optimization method for protein tertiary structure prediction.Toward optimal fragment generations for ab initio protein structure assembly.Ab initio modeling of small proteins by iterative TASSER simulations.New compstatin variants through two de novo protein design frameworks.Computational methods for de novo protein design and its applications to the human immunodeficiency virus 1, purine nucleoside phosphorylase, ubiquitin specific protease 7, and histone demethylases.Enhanced Bounding Techniques to Reduce the Protein Conformational Search SpaceDiscovery of entry inhibitors for HIV-1 via a new de novo protein design framework.Computational design of the lasso peptide antibiotic microcin J25.Enhanced Inter-helical Residue Contact Prediction in Transmembrane Proteins.Evaluation of protein dihedral angle prediction methods.Improved contact predictions using the recognition of protein like contact patternsModularity of Protein Folds as a Tool for Template-Free Modeling of Structures.De novo peptide design with C3a receptor agonist and antagonist activities: theoretical predictions and experimental validation.Toward full-sequence de novo protein design with flexible templates for human beta-defensin-2.Mutations affecting the oligomerization interface of G-protein-coupled receptors revealed by a novel de novo protein design frameworkPredicting protein contact map using evolutionary and physical constraints by integer programming.Improving strand pairing prediction through exploring folding cooperativity.Protein WISDOM: a workbench for in silico de novo design of biomoleculesBhageerath: an energy based web enabled computer software suite for limiting the search space of tertiary structures of small globular proteins.Indications that "codon boundaries" are physico-chemically defined and that protein-folding information is contained in the redundant exon bases.Generalized pattern search algorithm for Peptide structure prediction.bbcontacts: prediction of β-strand pairing from direct coupling patterns.A Design-for-Yield Algorithm to Assess and Improve the Structural and Energetic Robustness of Proteins and Drugs
P2860
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P2860
ASTRO-FOLD: a combinatorial and global optimization framework for Ab initio prediction of three-dimensional structures of proteins from the amino acid sequence.
description
2003 nî lūn-bûn
@nan
2003 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2003 թվականի հոտեմբերին հրատարակված գիտական հոդված
@hy
2003年の論文
@ja
2003年論文
@yue
2003年論文
@zh-hant
2003年論文
@zh-hk
2003年論文
@zh-mo
2003年論文
@zh-tw
2003年论文
@wuu
name
ASTRO-FOLD: a combinatorial an ...... from the amino acid sequence.
@ast
ASTRO-FOLD: a combinatorial an ...... from the amino acid sequence.
@en
ASTRO-FOLD: a combinatorial an ...... from the amino acid sequence.
@nl
type
label
ASTRO-FOLD: a combinatorial an ...... from the amino acid sequence.
@ast
ASTRO-FOLD: a combinatorial an ...... from the amino acid sequence.
@en
ASTRO-FOLD: a combinatorial an ...... from the amino acid sequence.
@nl
prefLabel
ASTRO-FOLD: a combinatorial an ...... from the amino acid sequence.
@ast
ASTRO-FOLD: a combinatorial an ...... from the amino acid sequence.
@en
ASTRO-FOLD: a combinatorial an ...... from the amino acid sequence.
@nl
P2860
P1433
P1476
ASTRO-FOLD: a combinatorial an ...... from the amino acid sequence.
@en
P2093
C A Floudas
J L Klepeis
P2860
P304
P356
10.1016/S0006-3495(03)74640-2
P407
P577
2003-10-01T00:00:00Z