Error correction of high-throughput sequencing datasets with non-uniform coverage. - Wikidata - awgldk - TriplyDB

Error correction of high-throughput sequencing datasets with non-uniform coverage.

Error correction of high-throughput sequencing datasets with non-uniform coverage.

http://www.wikidata.org/entity/Q34193708

about

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing The A, C, G, and T of Genome Assembly Best practices for evaluating single nucleotide variant calling methods for microbial genomics BayesHammer: Bayesian clustering for error correction in single-cell sequencing Using structural and evolutionary information to detect and correct pyrosequencing errors in noncoding RNAs Probabilistic error correction for RNA sequencing A bioinformatician's guide to the forefront of suffix array construction algorithms Musket: a multistage k-mer spectrum-based error corrector for Illumina sequence data.DRISEE overestimates errors in metagenomic sequencing data.Next-generation sequence assembly: four stages of data processing and computational challenges These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure.Correcting Illumina data.Phylogenetically typing bacterial strains from partial SNP genotypes observed from direct sequencing of clinical specimen metagenomic data.Karect: accurate correction of substitution, insertion and deletion errors for next-generation sequencing data.RecountDB: a database of mapped and count corrected transcribed sequences.A comparative study of k-spectrum-based error correction methods for next-generation sequencing data analysis.From next-generation resequencing reads to a high-quality variant data set.ntCard: a streaming algorithm for cardinality estimation in genomics data.MapReduce for accurate error correction of next-generation sequencing data.From reads to operational taxonomic units: an ensemble processing pipeline for MiSeq amplicon sequencing data IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth.BLESS: bloom filter-based error correction solution for high-throughput sequencing reads.GapFiller: a de novo assembly approach to fill the gap within paired reads.Denoising DNA deep sequencing data-high-throughput sequencing errors and their correction.Genome reassembly with high-throughput sequencing data.Lighter: fast and memory-efficient sequencing error correction without counting.Turtle: identifying frequent k-mers with cache-efficient algorithms.IgRepertoireConstructor: a novel algorithm for antibody repertoire construction and immunoproteogenomics analysis.EC: an efficient error correction algorithm for short reads In search of perfect reads.SEQuel: improving the accuracy of genome assemblies.Phylogenetic and genomic diversity in isolates from the globally distributed Acinetobacter baumannii ST25 lineage Ultrafast clustering algorithms for metagenomic sequence analysis.Draft Genome Sequence of Bacillus megaterium BHG1.1, a Strain Isolated from Bar-Headed Goose (Anser indicus) Feces on the Qinghai-Tibet Plateau Use of Multiple Sequencing Technologies To Produce a High-Quality Genome of the Fungus Pseudogymnoascus destructans, the Causative Agent of Bat White-Nose Syndrome The MaSuRCA genome assembler.Draft Genome Sequence of Staphylococcus hominis BHG17 Isolated from Wild Bar-Headed Goose (Anser indicus) Feces.A survey of error-correction methods for next-generation sequencing.Next generation sequencing and rare genetic variants: from human population studies to medical genetics.DUDE-Seq: Fast, flexible, and robust denoising for targeted amplicon sequencing

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P2860

Error correction of high-throughput sequencing datasets with non-uniform coverage.

http://www.wikidata.org/entity/Q34193708

description

2011 nî lūn-bûn

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2011 թուականի Յուլիսին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի հուլիսին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

@zh-hant

2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

Error correction of high-throughput sequencing datasets with non-uniform coverage.

@ast

Error correction of high-throughput sequencing datasets with non-uniform coverage.

@en

Error correction of high-throughput sequencing datasets with non-uniform coverage.

@nl

type

label

Error correction of high-throughput sequencing datasets with non-uniform coverage.

@ast

Error correction of high-throughput sequencing datasets with non-uniform coverage.

@en

Error correction of high-throughput sequencing datasets with non-uniform coverage.

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prefLabel

Error correction of high-throughput sequencing datasets with non-uniform coverage.

@ast

Error correction of high-throughput sequencing datasets with non-uniform coverage.

@en

Error correction of high-throughput sequencing datasets with non-uniform coverage.

@nl

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Error correction of high-throughput sequencing datasets with non-uniform coverage.

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Boyko Kakaradov

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Eric Scott

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Paul Medvedev

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Pavel Pevzner

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P2860

The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families

Whole genome amplification and de novo assembly of single bacterial cells.

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Genome sequencing in microfabricated high-density picolitre reactors

An Eulerian path approach to DNA fragment assembly

Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species

Metagenomic analysis of the human distal gut microbiome

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

PatternHunter: faster and more sensitive homology search

Specific single-cell isolation and genomic amplification of uncultured microorganisms.

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i137-41

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10.1093/BIOINFORMATICS/BTR208

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13

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27

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51230538

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21685062

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