Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study. - Wikidata - awgldk - TriplyDB

Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study.

Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study.

http://www.wikidata.org/entity/Q34204436

about

The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium inaugural meeting report Next generation sequencing technology and genomewide data analysis: Perspectives for retinal research RNA-Seq methods for transcriptome analysis Comprehensive Assessments of RNA-seq by the SEQC Consortium: FDA-Led Efforts Advance Precision Medicine Genomic assays for Epstein-Barr virus-positive gastric adenocarcinoma Vials: Visualizing Alternative Splicing of Genes.A toolbox for miRNA analysis Evaluating the Stability of RNA-Seq Transcriptome Profiles and Drug-Induced Immune-Related Expression Changes in Whole Blood Assessment of pharmacogenomic agreement An optimized protocol for generation and analysis of Ion Proton sequencing reads for RNA-Seq Informatics for RNA Sequencing: A Web Resource for Analysis on the Cloud.Detecting and correcting systematic variation in large-scale RNA sequencing data Comparative Transcriptome Analyses of Resistant and Susceptible Near-Isogenic Wheat Lines following Inoculation with Blumeria graminis f. sp. tritici Assessing the consistency of public human tissue RNA-seq data sets.A Review on Recent Computational Methods for Predicting Noncoding RNAs.Proanthocyanidin accumulation and transcriptional responses in the seed coat of cranberry beans (Phaseolus vulgaris L.) with different susceptibility to postharvest darkening.Clinical Genomics: Challenges and Opportunities qSVA framework for RNA quality correction in differential expression analysis Translating RNA sequencing into clinical diagnostics: opportunities and challenges.Comparative exomics of Phalaris cultivars under salt stress Cross-platform ultradeep transcriptomic profiling of human reference RNA samples by RNA-Seq.Application of Next Generation Sequencing for personalized medicine for sudden cardiac death.Tissue-specific transcriptome sequencing analysis expands the non-human primate reference transcriptome resource (NHPRTR).The impact of read length on quantification of differentially expressed genes and splice junction detection.Development and Validation of EST-SSR Markers from the Transcriptome of Adzuki Bean (Vigna angularis).Mining the Archives: A Cross-Platform Analysis of Gene Expression Profiles in Archival Formalin-Fixed Paraffin-Embedded Tissues.Transcriptome analysis of 20 taxonomically related benzylisoquinoline alkaloid-producing plants.Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology.Plastic and Evolved Responses to Global Change: What Can We Learn from Comparative Transcriptomics?RNA sequencing of transcriptomes in human brain regions: protein-coding and non-coding RNAs, isoforms and alleles Comprehensive evaluation of AmpliSeq transcriptome, a novel targeted whole transcriptome RNA sequencing methodology for global gene expression analysis.AuPairWise: A Method to Estimate RNA-Seq Replicability through Co-expression.ABSSeq: a new RNA-Seq analysis method based on modelling absolute expression differences variancePartition: interpreting drivers of variation in complex gene expression studies.Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive.Geospatial Resolution of Human and Bacterial Diversity with City-Scale Metagenomics Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders.Identification of Mild Freezing Shock Response Pathways in Barley Based on Transcriptome Profiling.RNA-seq of human reference RNA samples using a thermostable group II intron reverse transcriptase.Direct and Absolute Quantification of over 1800 Yeast Proteins via Selected Reaction Monitoring.

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Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study.

http://www.wikidata.org/entity/Q34204436

description

2014 nî lūn-bûn

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2014 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2014 թվականի օգոստոսին հրատարակված գիտական հոդված

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2014年の論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年论文

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Nature Biotechnology

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Agnes Viale

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Belynda Hicks

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Charles M Nicolet

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Chris Wright

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Christopher E Mason

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Cynthia Hendrickson

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David Roberson

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Deborah Grove

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Dewey Kim

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Don A Baldwin

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A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers.

Comparison of next-generation sequencing systems

Mapping and quantifying mammalian transcriptomes by RNA-Seq

An integrated map of genetic variation from 1,092 human genomes

RNA-Seq: a revolutionary tool for transcriptomics

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

Biases in Illumina transcriptome sequencing caused by random hexamer priming

Sequencing technologies and genome sequencing

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

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915-925

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10.1038/NBT.2972

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9

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32

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Sagar Chhangawala

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