Coverage evaluation of universal bacterial primers using the metagenomic datasets. - Wikidata - awgldk - TriplyDB

Coverage evaluation of universal bacterial primers using the metagenomic datasets.

Coverage evaluation of universal bacterial primers using the metagenomic datasets.

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Considerations For Optimizing Microbiome Analysis Using a Marker Gene Trachoma and Ocular Chlamydial Infection in the Era of Genomics The impact of different methods of DNA extraction on microbial community measures of BALF samples based on metagenomic data.Microbial profiles of a drinking water resource based on different 16S rRNA V regions during a heavy cyanobacterial bloom in Lake Taihu, China.The bias associated with amplicon sequencing does not affect the quantitative assessment of bacterial community dynamics Random whole metagenomic sequencing for forensic discrimination of soils.Capillary electrophoresis ribosomal RNA single-stranded conformation polymorphism: a new approach for characterization of low-diversity microbial communities.ESTIMATING BACTERIAL DIVERSITY IN SCIRTOTHRIPS DORSALIS (THYSANOPTERA: THRIPIDAE) VIA NEXT GENERATION SEQUENCING Analysis of the bacterial communities associated with different drinking water treatment processes.Changes in diversity, abundance, and structure of soil bacterial communities in Brazilian Savanna under different land use systems.Meta-analyses of studies of the human microbiota.The effect of primer choice and short read sequences on the outcome of 16S rRNA gene based diversity studies.The potential of metatranscriptomics for identifying screening targets for bacterial vaginosis Analysis of microbial diversity by pyrosequencing the small-subunit ribosomal RNA without PCR amplification.Obtaining genomes from uncultivated environmental microorganisms using FACS-based single-cell genomics.Application of Locked Nucleic Acid (LNA) oligonucleotide-PCR clamping technique to selectively PCR amplify the SSU rRNA genes of bacteria in investigating the plant-associated community structures.Bacterial communities in neonatal feces are similar to mothers' placentae Pivotal roles of phyllosphere microorganisms at the interface between plant functioning and atmospheric trace gas dynamics.Deconstructing the polymerase chain reaction: understanding and correcting bias associated with primer degeneracies and primer-template mismatches.Obtaining long 16S rDNA sequences using multiple primers and its application on dioxin-containing samples Gastric microbiota and predicted gene functions are altered after subtotal gastrectomy in patients with gastric cancer Evaluation of the effects of intrapartum antibiotic prophylaxis on newborn intestinal microbiota using a sequencing approach targeted to multi hypervariable 16S rDNA regions.Assessment of Common and Emerging Bioinformatics Pipelines for Targeted Metagenomics Identification and bioactive potential of marine microorganisms from selected Florida coastal areas.How conserved are the conserved 16S-rRNA regions?Characterization of bacterial community associated with phytoplankton bloom in a eutrophic lake in South Norway using 16S rRNA gene amplicon sequence analysis MIPE: A metagenome-based community structure explorer and SSU primer evaluation tool Diel-scale temporal dynamics recorded for bacterial groups in Namib Desert soil.Design and experimental application of a novel non-degenerate universal primer set that amplifies prokaryotic 16S rRNA genes with a low possibility to amplify eukaryotic rRNA genes.International Standards for Genomes, Transcriptomes, and Metagenomes.Novel micelle PCR-based method for accurate, sensitive and quantitative microbiota profiling.Degenerate ITS7 primer enhances oomycete community coverage and PCR sensitivity to Aphanomyces species, economically important plant pathogens.Microbial Community Analysis with Ribosomal Gene Fragments from Shotgun Metagenomes.Suppressing activity of staurosporine from Streptomyces sp. MJM4426 against rice bacterial blight disease.Do Bacterial Symbionts Govern Aphid's Dropping Behavior?An efficient strategy using k-mers to analyse 16S rRNA sequences.Total rRNA-Seq Analysis Gives Insight into Bacterial, Fungal, Protozoal and Archaeal Communities in the Rumen Using an Optimized RNA Isolation Method.A systematic search for discriminating sites in the 16S ribosomal RNA gene Modified RNA-seq method for microbial community and diversity analysis using rRNA in different types of environmental samples.Isolation and Characterization of Multi-Metal-Resistant Halomonas sp. MG from Tamil Nadu Magnesite Ore Soil in India.

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Coverage evaluation of universal bacterial primers using the metagenomic datasets.

http://www.wikidata.org/entity/Q34255051

description

2012 nî lūn-bûn

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2012 թուականի Մայիսին հրատարակուած գիտական յօդուած

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2012 թվականի մայիսին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年论文

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name

Coverage evaluation of universal bacterial primers using the metagenomic datasets.

@ast

Coverage evaluation of universal bacterial primers using the metagenomic datasets.

@en

Coverage evaluation of universal bacterial primers using the metagenomic datasets.

@nl

type

label

Coverage evaluation of universal bacterial primers using the metagenomic datasets.

@ast

Coverage evaluation of universal bacterial primers using the metagenomic datasets.

@en

Coverage evaluation of universal bacterial primers using the metagenomic datasets.

@nl

prefLabel

Coverage evaluation of universal bacterial primers using the metagenomic datasets.

@ast

Coverage evaluation of universal bacterial primers using the metagenomic datasets.

@en

Coverage evaluation of universal bacterial primers using the metagenomic datasets.

@nl

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1471-2180-12-66

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BMC Microbiology

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Coverage evaluation of universal bacterial primers using the metagenomic datasets.

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Chong-Yu Chen

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Dan-Ping Mao

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Quan Zhou

http://www.w3.org/2001/XMLSchema#string

Zhe-Xue Quan

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P2860

CAMERA: a community resource for metagenomics

Detection and quantification of gene expression in environmental bacteriology

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis

Reclassification of the crenarchael orders and families in accordance with 16S rRNA sequence data

Transfer of Thiosphaera pantotropha to Paracoccus denitrificans

Assessing diversity and biogeography of aerobic anoxygenic phototrophic bacteria in surface waters of the Atlantic and Pacific Oceans using the Global Ocean Sampling expedition metagenomes

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

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1471-2180-12-66

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12

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