Dual binding modes for an HMG domain from human HMGB2 on DNA - Wikidata - awgldk - TriplyDB

Dual binding modes for an HMG domain from human HMGB2 on DNA

Dual binding modes for an HMG domain from human HMGB2 on DNA

http://www.wikidata.org/entity/Q34350473

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Structural Analysis of HMGD–DNA Complexes Reveals Influence of Intercalation on Sequence Selectivity and DNA Bending DNA bridging and looping by HMO1 provides a mechanism for stabilizing nucleosome-free chromatin.Role of the acidic tail of high mobility group protein B1 (HMGB1) in protein stability and DNA bending HMGB binding to DNA: single and double box motifs The nucleoid-associated protein Dan organizes chromosomal DNA through rigid nucleoprotein filament formation in E. coli during anoxia.Physical organization of DNA by multiple non-specific DNA-binding modes of integration host factor (IHF).Exploring the interaction of ruthenium(II) polypyridyl complexes with DNA using single-molecule techniques.Effect of temperature on the intrinsic flexibility of DNA and its interaction with architectural proteins.Combining optical trapping, fluorescence microscopy and micro-fluidics for single molecule studies of DNA-protein interactions.Biophysical characterization of DNA binding from single molecule force measurements DNA curvature and flexibility in vitro and in vivo.Gene repression by minimal lac loops in vivo.Concentration-dependent exchange accelerates turnover of proteins bound to double-stranded DNA.Effects of nucleoid proteins on DNA repression loop formation in Escherichia coli Mechanism of chromosome compaction and looping by the Escherichia coli nucleoid protein Fis DNA-Segment-Facilitated Dissociation of Fis and NHP6A from DNA Detected via Single-Molecule Mechanical Response.Chromatin conformation governs T-cell receptor Jβ gene segment usage.Deaminase-independent inhibition of HIV-1 reverse transcription by APOBEC3G.Single-molecule FRET analysis of DNA binding and bending by yeast HMGB protein Nhp6A Crenarchaeal chromatin proteins Cren7 and Sul7 compact DNA by inducing rigid bends.Single-molecule kinetics reveal microscopic mechanism by which High-Mobility Group B proteins alter DNA flexibility.DNA overstretching in the presence of glyoxal: structural evidence of force-induced DNA melting.Mechanism of DNA flexibility enhancement by HMGB proteins.Cisplatin induces loop structures and condensation of single DNA molecules.Distinct double- and single-stranded DNA binding of E. coli replicative DNA polymerase III alpha subunit.Optical tweezers experiments resolve distinct modes of DNA-protein binding.Single-molecule studies of high-mobility group B architectural DNA bending proteins.Multiple-binding-site mechanism explains concentration-dependent unbinding rates of DNA-binding proteins.Structure and dynamics of the crenarchaeal nucleoid.Transient HMGB protein interactions with B-DNA duplexes and complexes.The supercoiling state of DNA determines the handedness of both H3 and CENP-A nucleosomes.Eukaryotic HMGB proteins as replacements for HU in E. coli repression loop formation.Determination of the number of proteins bound non-specifically to DNA.Resolving the contributions of two cooperative mechanisms to the DNA binding of AGT.Basic N-terminus of yeast Nhp6A regulates the mechanism of its DNA flexibility enhancement Magnetic tweezers measurements of the nanomechanical properties of DNA in the presence of drugs.Torsional sensing of small-molecule binding using magnetic tweezers.Understanding apparent DNA flexibility enhancement by HU and HMGB architectural proteins Modulation of T4 gene 32 protein DNA binding activity by the recombination mediator protein UvsY.Enhancement of DNA flexibility in vitro and in vivo by HMGB box A proteins carrying box B residues.

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P2860

Dual binding modes for an HMG domain from human HMGB2 on DNA

http://www.wikidata.org/entity/Q34350473

description

2005 nî lūn-bûn

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2005 թուականի Ապրիլին հրատարակուած գիտական յօդուած

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2005 թվականի ապրիլին հրատարակված գիտական հոդված

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2005年の論文

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2005年学术文章

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2005年学术文章

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2005年学术文章

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2005年学术文章

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2005年学术文章

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2005年學術文章

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name

Dual binding modes for an HMG domain from human HMGB2 on DNA

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Dual binding modes for an HMG domain from human HMGB2 on DNA

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Dual binding modes for an HMG domain from human HMGB2 on DNA

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type

label

Dual binding modes for an HMG domain from human HMGB2 on DNA

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Dual binding modes for an HMG domain from human HMGB2 on DNA

@en

Dual binding modes for an HMG domain from human HMGB2 on DNA

@nl

prefLabel

Dual binding modes for an HMG domain from human HMGB2 on DNA

@ast

Dual binding modes for an HMG domain from human HMGB2 on DNA

@en

Dual binding modes for an HMG domain from human HMGB2 on DNA

@nl

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BIOPHYSJ.104.052068

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Biophysical Journal

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Dual binding modes for an HMG domain from human HMGB2 on DNA

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P2093

L James Maher

http://www.w3.org/2001/XMLSchema#string

Mark C Williams

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Micah McCauley

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Philip R Hardwidge

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P2860

The nonspecific DNA-binding and -bending proteins HMG1 and HMG2 promote the assembly of complex nucleoprotein structures

High mobility group protein-1 (HMG-1) is a unique activator of p53

Solution structure of the HMG protein NHP6A and its interaction with DNA reveals the structural determinants for non-sequence-specific binding

The structure of a chromosomal high mobility group protein-DNA complex reveals sequence-neutral mechanisms important for non-sequence-specific DNA recognition

Structure of the A-domain of HMG1 and its interaction with DNA as studied by heteronuclear three- and four-dimensional NMR spectroscopy

Nhp6, an HMG1 protein, functions in SNR6 transcription by RNA polymerase III in S. cerevisiae.

Yeast HMG proteins NHP6A/B potentiate promoter-specific transcriptional activation in vivo and assembly of preinitiation complexes in vitro.

Direct mechanical measurements of the elasticity of single DNA molecules by using magnetic beads

Revised nomenclature for high mobility group (HMG) chromosomal proteins

HMG1 and 2, and related 'architectural' DNA-binding proteins

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353-364

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scholarly article

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10.1529/BIOPHYSJ.104.052068

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1

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15833996

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1366535

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