Sequence analysis of bacteriophage T4 DNA packaging/terminase genes 16 and 17 reveals a common ATPase center in the large subunit of viral terminases - Wikidata - awgldk - TriplyDB

Sequence analysis of bacteriophage T4 DNA packaging/terminase genes 16 and 17 reveals a common ATPase center in the large subunit of viral terminases

Sequence analysis of bacteriophage T4 DNA packaging/terminase genes 16 and 17 reveals a common ATPase center in the large subunit of viral terminases

http://www.wikidata.org/entity/Q34367372

about

The ancient Virus World and evolution of cells Structure and assembly of bacteriophage T4 head Bacteriophage T4 Genome Structure, assembly, and DNA packaging of the bacteriophage T4 head Mechanisms of DNA Packaging by Large Double-Stranded DNA Viruses The small terminase, gp16, of bacteriophage T4 is a regulator of the DNA packaging motor Propagating the missing bacteriophages: a large bacteriophage in a new class The DNA maturation domain of gpA, the DNA packaging motor protein of bacteriophage lambda, contains an ATPase site associated with endonuclease activity.Portal-large terminase interactions of the bacteriophage T4 DNA packaging machine implicate a molecular lever mechanism for coupling ATPase to DNA translocation Comparative genomics of the FtsK-HerA superfamily of pumping ATPases: implications for the origins of chromosome segregation, cell division and viral capsid packaging Identification of cohesive ends and genes encoding the terminase of phage 16-3 The generalized transducing Salmonella bacteriophage ES18: complete genome sequence and DNA packaging strategy.Mutations altering a structurally conserved loop-helix-loop region of a viral packaging motor change DNA translocation velocity and processivity Genome packaging in viruses.Single-molecule packaging initiation in real time by a viral DNA packaging machine from bacteriophage T4.Metagenomic exploration of viruses throughout the Indian Ocean.Orthologous gene clusters and taxon signature genes for viruses of prokaryotes Walker-A Motif Acts to Coordinate ATP Hydrolysis with Motor Output in Viral DNA Packaging.Specificity of interactions among the DNA-packaging machine components of T4-related bacteriophages.The functional domains of bacteriophage t4 terminase.The putative terminase subunit of herpes simplex virus 1 encoded by UL28 is necessary and sufficient to mediate interaction between pUL15 and pUL33.Revisiting the central dogma one molecule at a time.Regulation by interdomain communication of a headful packaging nuclease from bacteriophage T4.Sequence characteristics of T4-like bacteriophage IME08 benome termini revealed by high throughput sequencing.Herpes simplex virus 1 DNA packaging proteins encoded by UL6, UL15, UL17, UL28, and UL33 are located on the external surface of the viral capsid.Quantification of the DNA cleavage and packaging proteins U(L)15 and U(L)28 in A and B capsids of herpes simplex virus type 1.Probing individual environmental bacteria for viruses by using microfluidic digital PCR.Point mutations in exon I of the herpes simplex virus putative terminase subunit, UL15, indicate that the most conserved residues are essential for cleavage and packaging.Temperature-sensitive mutations in the putative herpes simplex virus type 1 terminase subunits pUL15 and pUL33 preclude viral DNA cleavage/packaging and interaction with pUL28 at the nonpermissive temperature.The dynamic pause-unpackaging state, an off-translocation recovery state of a DNA packaging motor from bacteriophage T4 Structural and Molecular Basis for Coordination in a Viral DNA Packaging Motor Biophysics of viral infectivity: matching genome length with capsid size.Mutagenesis of the murine cytomegalovirus M56 terminase gene.Diversity among the tailed-bacteriophages that infect the Enterobacteriaceae.Mycobacteriophages as Incubators for Intein Dissemination and Evolution.The Q motif of a viral packaging motor governs its force generation and communicates ATP recognition to DNA interaction.Structure-function analysis of the DNA translocating portal of the bacteriophage T4 packaging machine The DNA-packaging nanomotor of tailed bacteriophages.Single-molecule studies of viral DNA packaging.A mutation in UL15 of herpes simplex virus 1 that reduces packaging of cleaved genomes.

P2860

Q21093198-23929312-2A97-4CB4-B8A1-319DA1D6D23F Q21245107-93FFD3D5-FDB3-4347-8DEE-842DC96F1677 Q22061798-90ADE6FE-B3BA-433C-8077-2DF67BA585A7 Q26822645-EBA2B380-A081-4552-8EEF-2DF45F36C7F8 Q28069346-50A6DDB7-5E86-42BD-AF49-D98AA2258E1A Q28749848-70CE4D80-EEE0-487F-8EAC-F800FB75CCAE Q28763262-FDD9706E-040C-4A6D-93F5-FE035B29AFEF Q30480681-1B796F7E-D349-4F85-BE4C-38DDCDB58D9B Q30512694-F34E2D51-636B-489A-939C-9F5805161934 Q33207648-AC30A11A-C32C-440B-8C68-F1888C8563BE Q33716719-6AB86A1C-50D5-4440-99EF-D10B29CD18E9 Q33758566-267B02AE-7CA1-4C91-A52C-E3F28B3BA816 Q34025285-BCE2E1B8-C129-4D9B-996E-44EF7F0F34EF Q34167999-9C28D090-9819-4356-ADF9-41B5390EC69C Q34408776-E1EB4F1D-1FE0-4202-A1D9-CC2764334B67 Q34451821-5BA92E1C-44EC-4D5A-B4A7-76764793CB55 Q34504150-6728B56B-DBDA-4A84-909A-D94C659F23C6 Q34524720-EE9F6614-2426-4771-98B1-664722DEAC97 Q34537101-85D0A392-BB58-4F2B-8206-04DCDB432E39 Q34549501-016C9CAD-50FA-4998-8783-8CCCC98D701A Q34651289-C430DB27-7916-46A1-A044-3EBA897C2729 Q34711713-D8D7E225-47B2-4FE0-978D-2C062028D63C Q34779396-CDE0862B-C386-4DF6-8139-80D34777CD80 Q35019181-F2C372ED-A5F2-4633-A8BD-FE505452787F Q35139191-B306630C-974F-4796-BB16-2AC3067ECDB6 Q35543241-0C90A10C-D958-4B5A-882D-3C45C2B9E52B Q35682506-0490B813-50CB-4949-AA41-BD12EF2FAEA0 Q35802925-714365BF-C11C-4825-9410-5748F02A4AC5 Q36423980-5FA7C0F7-7B1C-4B8E-A6BA-AE7C5050B6DF Q36471341-2E9A654A-A032-4465-B977-897F56BC7894 Q36775858-B3D0E308-AC57-4CE9-A1EB-28C32C871678 Q37142304-B412BAE2-4F1E-4332-A06F-0923CA1DF690 Q37165587-A470832F-ADB2-4B8A-A60E-8076312F33A6 Q37190178-90088512-4E99-405E-982F-1AE0B6C6D37E Q37310366-40F3ACF7-D02D-4259-9257-B1E76166A9BD Q37321095-39BA1998-1C37-4CE9-ABFC-2F9538E74DBB Q37620593-C95A589C-739F-42EC-AD9A-876F6F02FBB9 Q37916223-12F410BA-376C-4436-982D-49D17274DFF3 Q37980640-8748AD87-99F7-418A-9190-36099E828FAA Q38959785-3A54484E-745C-41D4-B13C-B626ABCAA786

P2860

Sequence analysis of bacteriophage T4 DNA packaging/terminase genes 16 and 17 reveals a common ATPase center in the large subunit of viral terminases

http://www.wikidata.org/entity/Q34367372

description

2002 nî lūn-bûn

@nan

2002 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

@hyw

2002 թվականի սեպտեմբերին հրատարակված գիտական հոդված

@hy

2002年の論文

@ja

2002年論文

@yue

2002年論文

@zh-hant

2002年論文

@zh-hk

2002年論文

@zh-mo

2002年論文

@zh-tw

2002年论文

@wuu

name

Sequence analysis of bacteriop ...... ge subunit of viral terminases

@ast

Sequence analysis of bacteriop ...... ge subunit of viral terminases

@en

Sequence analysis of bacteriop ...... ge subunit of viral terminases

@nl

type

label

Sequence analysis of bacteriop ...... ge subunit of viral terminases

@ast

Sequence analysis of bacteriop ...... ge subunit of viral terminases

@en

Sequence analysis of bacteriop ...... ge subunit of viral terminases

@nl

prefLabel

Sequence analysis of bacteriop ...... ge subunit of viral terminases

@ast

Sequence analysis of bacteriop ...... ge subunit of viral terminases

@en

Sequence analysis of bacteriop ...... ge subunit of viral terminases

@nl

P1433

Q34367372-E62FE8F0-2768-4C3A-9464-CF3F20D6BF3A

P1476

Q34367372-A012877B-55FD-4DEB-850E-DEF47F465144

P2093

Q34367372-4EE01A0B-9176-41B4-9D0F-876B99F66968

Q34367372-A26B7E83-C34B-4084-9180-65BE04ACA646

Q34367372-E7A8F80F-E448-4570-B0B2-D965C5D02D20

Q34367372-F0BF8AF9-3C4F-4C89-88BE-3152CB7DA72E

P2860

Q34367372-03D703D2-6309-4F1C-8A92-07D7E772CF3C

Q34367372-0A62B3D6-E0FD-4ED6-B369-F6812ED09525

Q34367372-13D623C3-26A8-4CD3-BA33-4F8FBAAC145A

Q34367372-170B6AC9-6953-430D-9AC1-7AE9A5782C0D

Q34367372-1E0A86D1-0E96-44B2-B640-0ECB4BF6844B

Q34367372-2014A236-D004-4D4F-B516-BECC7529C098

Q34367372-235EA943-BA5B-488D-9E54-B859B54A11D4

Q34367372-27697F33-A1A4-4198-8D44-ADCAED6C6E64

Q34367372-283BB219-83F4-4792-AC89-37F018E2190F

Q34367372-2EE70AC1-9D7E-4CBC-A471-290391EB55CF

P304

Q34367372-A7A7A2F0-234F-4433-A148-9941F0FF6D28

P31

Q34367372-6AB91B0E-2890-4F70-B351-713A88F36099

P356

Q34367372-4B5C2888-211C-47A5-8E1B-B80976E7A990

P407

Q34367372-E39C3171-1CAA-4FAD-9C61-2BDC84F23375

P433

Q34367372-0801BD59-5CBF-4BFB-A546-27D967F342E4

P478

Q34367372-99564832-BA06-4001-8027-D7CCD03C3270

P577

Q34367372-3B862FFE-BBA7-4E26-ACC4-0EC8CC916E0A

P5875

Q34367372-AD9DAAA5-DAFA-46CE-8615-5E9A5A891F46

P698

Q34367372-C0C77E0C-95FC-407B-9E22-ED384E158260

P921

Q34367372-F0367F44-1949-4885-8AFF-121191D210CA

P932

Q34367372-808FAF92-785B-440F-AC92-5D7C789B6CE3

P356

P1433

Nucleic Acids Research

P1476

Sequence analysis of bacteriop ...... ge subunit of viral terminases

@en

P2093

Michael S Mitchell

http://www.w3.org/2001/XMLSchema#string

Shigenobu Matsuzaki

http://www.w3.org/2001/XMLSchema#string

Shosuke Imai

http://www.w3.org/2001/XMLSchema#string

Venigalla B Rao

http://www.w3.org/2001/XMLSchema#string

P2860

Protein-DNA Recognition

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Phylogeny of the major head and tail genes of the wide-ranging T4-type bacteriophages

Mutational analysis of a DEAD box RNA helicase: the mammalian translation initiation factor eIF-4A

Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold

Crystal structure of the ATPase domain of translation initiation factor 4A from Saccharomyces cerevisiae--the prototype of the DEAD box protein family

Structure of the bacteriophage phi29 DNA packaging motor

Crystal structure of a DEAD box protein from the hyperthermophile Methanococcus jannaschii

The structure of the E. coli recA protein monomer and polymer

P304

4009-4021

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1093/NAR/GKF524

http://www.w3.org/2001/XMLSchema#string

P407

P433

18

http://www.w3.org/2001/XMLSchema#string

P478

30

http://www.w3.org/2001/XMLSchema#string

P577

2002-09-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

279610484

http://www.w3.org/2001/XMLSchema#string

P698

12235385

http://www.w3.org/2001/XMLSchema#string

P921

P932

137109

http://www.w3.org/2001/XMLSchema#string