The RNA polymerase III transcriptome revealed by genome-wide localization and activity-occupancy relationships. - Wikidata - awgldk - TriplyDB

The RNA polymerase III transcriptome revealed by genome-wide localization and activity-occupancy relationships.

The RNA polymerase III transcriptome revealed by genome-wide localization and activity-occupancy relationships.

http://www.wikidata.org/entity/Q34383075

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In vivo analysis of Caenorhabditis elegans noncoding RNA promoter motifs Human Maf1 negatively regulates RNA polymerase III transcription via the TFIIB family members Brf1 and Brf2 Exploiting tRNAs to Boost Virulence Regulation of pol III transcription by nutrient and stress signaling pathways Comparative overview of RNA polymerase II and III transcription cycles, with focus on RNA polymerase III termination and reinitiation Autoregulation of the Rsc4 Tandem Bromodomain by Gcn5 Acetylation Mod5 protein binds to tRNA gene complexes and affects local transcriptional silencing.A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters Genome-wide location analysis reveals a role of TFIIS in RNA polymerase III transcription Requirement of Nhp6 proteins for transcription of a subset of tRNA genes and heterochromatin barrier function in Saccharomyces cerevisiae The Yaf9 component of the SWR1 and NuA4 complexes is required for proper gene expression, histone H4 acetylation, and Htz1 replacement near telomeres.Mapping DNA-protein interactions in large genomes by sequence tag analysis of genomic enrichment A comprehensive tRNA deletion library unravels the genetic architecture of the tRNA pool A nucleosomal surface defines an integration hotspot for the Saccharomyces cerevisiae Ty1 retrotransposon Measuring chromatin interaction dynamics on the second time scale at single-copy genes.Visual analysis of the yeast 5S rRNA gene transcriptome: regulation and role of La protein Reintroducing domesticated wild mice to sociality induces adaptive transgenerational effects on MUP expression.Quantifying ChIP-seq data: a spiking method providing an internal reference for sample-to-sample normalization.Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing.Immobilization of Escherichia coli RNA polymerase and location of binding sites by use of chromatin immunoprecipitation and microarrays.Iwr1 protein is important for preinitiation complex formation by all three nuclear RNA polymerases in Saccharomyces cerevisiae.Characterizing a collective and dynamic component of chromatin immunoprecipitation enrichment profiles in yeast Pol II and its associated epigenetic marks are present at Pol III-transcribed noncoding RNA genes.Experimental annotation of the human pathogen Candida albicans coding and noncoding transcribed regions using high-resolution tiling arrays Modulation of yeast genome expression in response to defective RNA polymerase III-dependent transcription.tRNA gene identity affects nuclear positioning.Human RNA polymerase III transcriptomes and relationships to Pol II promoter chromatin and enhancer-binding factors Full repression of RNA polymerase III transcription requires interaction between two domains of its negative regulator Maf1 Genome-wide characterization of methylguanosine-capped and polyadenylated small RNAs in the rice blast fungus Magnaporthe oryzae.Genome-wide distribution of RNA-DNA hybrids identifies RNase H targets in tRNA genes, retrotransposons and mitochondria Compromised RNA polymerase III complex assembly leads to local alterations of intergenic RNA polymerase II transcription in Saccharomyces cerevisiae.Genomic insights of protein arginine methyltransferase Hmt1 binding reveals novel regulatory functions A unique nucleosome arrangement, maintained actively by chromatin remodelers facilitates transcription of yeast tRNA genes The transcriptional activity of RNA polymerase I is a key determinant for the level of all ribosome components.Autoregulation of an RNA polymerase II promoter by the RNA polymerase III transcription factor III C (TF(III)C) complex.Global genome organization mediated by RNA polymerase III-transcribed genes in fission yeast.RNA polymerase III transcriptomes in human embryonic stem cells and induced pluripotent stem cells, and relationships with pluripotency transcription factors Protein kinase A regulates RNA polymerase III transcription through the nuclear localization of Maf1 Repression of ADH1 and ADH3 during zinc deficiency by Zap1-induced intergenic RNA transcripts.Differential Phosphorylation of RNA Polymerase III and the Initiation Factor TFIIIB in Saccharomyces cerevisiae.

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The RNA polymerase III transcriptome revealed by genome-wide localization and activity-occupancy relationships.

http://www.wikidata.org/entity/Q34383075

description

2003 nî lūn-bûn

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2003 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

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2003年の論文

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2003年論文

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Proceedings of the National Academy of Sciences of the United States of America

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The RNA polymerase III transcr ...... tivity-occupancy relationships

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Allen J Stewart

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Bradley R Cairns

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Douglas N Roberts

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P2860

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

Maf1p, a negative effector of RNA polymerase III in Saccharomyces cerevisiae

Genome-wide location of yeast RNA polymerase III transcription machinery

Isolation of TFC1, a gene encoding one of two DNA-binding subunits of yeast transcription factor tau (TFIIIC)

TFC3: gene encoding the B-block binding subunit of the yeast transcription factor IIIC

Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association.

A mutation in the second largest subunit of TFIIIC increases a rate-limiting step in transcription by RNA polymerase III.

Purification and characterization of Saccharomyces cerevisiae transcription factor TFIIIC. Polypeptide composition defined with polyclonal antibodies.

TATA binding protein-associated CK2 transduces DNA damage signals to the RNA polymerase III transcriptional machinery.

S. cerevisiae TFIIIB is the transcription initiation factor proper of RNA polymerase III, while TFIIIA and TFIIIC are assembly factors.

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