Differentiation-specific histone modifications reveal dynamic chromatin interactions and partners for the intestinal transcription factor CDX2 - Wikidata - awgldk - TriplyDB

Differentiation-specific histone modifications reveal dynamic chromatin interactions and partners for the intestinal transcription factor CDX2

Differentiation-specific histone modifications reveal dynamic chromatin interactions and partners for the intestinal transcription factor CDX2

http://www.wikidata.org/entity/Q34404177

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Stomach development, stem cells and disease Intronic cis-regulatory modules mediate tissue-specific and microbial control of angptl4/fiaf transcription Epigenetic regulation of the intestinal epithelium The transcriptional repressor Blimp1/Prdm1 regulates postnatal reprogramming of intestinal enterocytes Association of levels of fasting glucose and insulin with rare variants at the chromosome 11p11.2-MADD locus: Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Targeted Sequencing Study Cistrome plasticity and mechanisms of cistrome reprogramming Annotation of functional variation in personal genomes using RegulomeDB ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data.Arpeggio: harmonic compression of ChIP-seq data reveals protein-chromatin interaction signatures.Large-scale quality analysis of published ChIP-seq data.Combinatorial control of temporal gene expression in the Drosophila wing by enhancers and core promoters.NF-E2, FLI1 and RUNX1 collaborate at areas of dynamic chromatin to activate transcription in mature mouse megakaryocytes Triplication of a 21q22 region contributes to B cell transformation through HMGN1 overexpression and loss of histone H3 Lys27 trimethylation.An integrative analysis reveals functional targets of GATA6 transcriptional regulation in gastric cancer.Obesity, rather than diet, drives epigenomic alterations in colonic epithelium resembling cancer progression.Four simple rules that are sufficient to generate the mammalian blastocyst A novel MMP12 locus is associated with large artery atherosclerotic stroke using a genome-wide age-at-onset informed approach Chromatin profiling reveals regulatory network shifts and a protective role for hepatocyte nuclear factor 4α during colitis.Discovering transcription factor regulatory targets using gene expression and binding data Broadly permissive intestinal chromatin underlies lateral inhibition and cell plasticity.Enhancers as information integration hubs in development: lessons from genomics.Phosphorylated and sumoylation-deficient progesterone receptors drive proliferative gene signatures during breast cancer progression Defining new criteria for selection of cell-based intestinal models using publicly available databases.Transcriptional regulation of the intestinal nuclear bile acid farnesoid X receptor (FXR) by the caudal-related homeobox 2 (CDX2).Cdx1 and Cdx2 exhibit transcriptional specificity in the intestine.Active enhancers are delineated de novo during hematopoiesis, with limited lineage fidelity among specified primary blood cells.Transformation of intestinal stem cells into gastric stem cells on loss of transcription factor Cdx2.Essential and redundant functions of caudal family proteins in activating adult intestinal genes Transcription factors GATA4 and HNF4A control distinct aspects of intestinal homeostasis in conjunction with transcription factor CDX2.The cultural divide: exponential growth in classical 2D and metabolic equilibrium in 3D environments.Cdx2 homeoprotein inhibits non-homologous end joining in colon cancer but not in leukemia cells.Overexpression of caudal-related homeobox transcription factor 2 inhibits the growth of transplanted colorectal tumors in nude mice.Meta-analysis of the TNFAIP3 region in psoriasis reveals a risk haplotype that is distinct from other autoimmune diseases Control of stomach smooth muscle development and intestinal rotation by transcription factor BARX1.Differential DNase I hypersensitivity reveals factor-dependent chromatin dynamics.Differential Effects of Hepatocyte Nuclear Factor 4α Isoforms on Tumor Growth and T-Cell Factor 4/AP-1 Interactions in Human Colorectal Cancer Cells.Improved models for transcription factor binding site identification using nonindependent interactions Molecular profile of 5-fluorouracil pathway genes in colorectal carcinoma.Alteration of colonic stem cell gene signatures during the regenerative response to injury Transcriptional networks driving enhancer function in the CFTR gene.

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Differentiation-specific histone modifications reveal dynamic chromatin interactions and partners for the intestinal transcription factor CDX2

http://www.wikidata.org/entity/Q34404177

description

2010 nî lūn-bûn

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2010 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի նոյեմբերին հրատարակված գիտական հոդված

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2010年の論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年论文

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name

Differentiation-specific histo ...... inal transcription factor CDX2

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Differentiation-specific histo ...... inal transcription factor CDX2

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Differentiation-specific histo ...... inal transcription factor CDX2

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type

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Differentiation-specific histo ...... inal transcription factor CDX2

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Differentiation-specific histo ...... inal transcription factor CDX2

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Differentiation-specific histo ...... inal transcription factor CDX2

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Differentiation-specific histo ...... inal transcription factor CDX2

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Differentiation-specific histo ...... inal transcription factor CDX2

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Differentiation-specific histo ...... inal transcription factor CDX2

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J.DEVCEL.2010.10.006

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Developmental Cell

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Differentiation-specific histo ...... inal transcription factor CDX2

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Clifford A Meyer

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Hyunjin Shin

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Michael P Verzi

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Ramesh A Shivdasani

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Rita Sulahian

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Robert K Montgomery

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X Shirley Liu

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Model-based analysis of ChIP-Seq (MACS)

Bcl2 regulation by the melanocyte master regulator Mitf modulates lineage survival and melanoma cell viability

The beta-catenin/TCF-4 complex imposes a crypt progenitor phenotype on colorectal cancer cells

H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions

Homeosis and intestinal tumours in Cdx2 mutant mice

FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription

Nucleosome-binding affinity as a primary determinant of the nuclear mobility of the pioneer transcription factor FoxA

Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

Wnt/beta-catenin signaling in development and disease

High-resolution profiling of histone methylations in the human genome

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5

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Housheng Hansen He

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