GWASTools: an R/Bioconductor package for quality control and analysis of genome-wide association studies. - Wikidata - awgldk - TriplyDB

GWASTools: an R/Bioconductor package for quality control and analysis of genome-wide association studies.

GWASTools: an R/Bioconductor package for quality control and analysis of genome-wide association studies.

http://www.wikidata.org/entity/Q34439401

about

A Parallel Population Genomic and Hydrodynamic Approach to Fishery Management of Highly-Dispersive Marine Invertebrates: The Case of the Fijian Black-Lip Pearl Oyster Pinctada margaritifera Fitness consequences of polymorphic inversions in the zebra finch genome A genome-wide association study identifies new susceptibility loci for esophageal adenocarcinoma and Barrett's esophagus A high-performance computing toolset for relatedness and principal component analysis of SNP data.Swept away: ocean currents and seascape features influence genetic structure across the 18,000 Km Indo-Pacific distribution of a marine invertebrate, the black-lip pearl oyster Pinctada margaritifera.SNPQC--an R pipeline for quality control of Illumina SNP genotyping array data.PBAP: a pipeline for file processing and quality control of pedigree data with dense genetic markers HLA imputation in an admixed population: An assessment of the 1000 Genomes data as a training set.Novel metrics to measure coverage in whole exome sequencing datasets reveal local and global non-uniformity.Genome-wide approach identifies a novel gene-maternal pre-pregnancy BMI interaction on preterm birth.A Preliminary Genome-Wide Association Study of Pain-Related Fear: Implications for Orofacial Pain.CrypticIBDcheck: an R package for checking cryptic relatedness in nominally unrelated individuals.The cyclic AMP pathway is a sex-specific modifier of glioma risk in type I neurofibromatosis patients.Association of candidate single nucleotide polymorphisms with somatic mutation of the epidermal growth factor receptor pathway Genetics of hand grip strength in mid to late life.Genome-wide association study identifies peanut allergy-specific loci and evidence of epigenetic mediation in US children Integrated genomic analyses in bronchopulmonary dysplasia.Quantifying realized inbreeding in wild and captive animal populations.Exact Inference for Hardy-Weinberg Proportions with Missing Genotypes: Single and Multiple Imputation Genetic Diversity and Association Studies in US Hispanic/Latino Populations: Applications in the Hispanic Community Health Study/Study of Latinos Genome-wide association study identifies variation at 6q25.1 associated with survival in multiple myeloma.Burden of potentially pathologic copy number variants is higher in children with isolated congenital heart disease and significantly impairs covariate-adjusted transplant-free survival.Testing for Hardy-Weinberg equilibrium at biallelic genetic markers on the X chromosome.A genome-wide association study on amyotrophic lateral sclerosis in the Taiwanese Han population.Genome-wide association study of heavy smoking and daily/nondaily smoking in the Hispanic Community Health Study / Study of Latinos (HCHS/SOL).Association mapping of morphological traits in wild and captive zebra finches: reliable within, but not between populations.Genome-wide association study of generalized anxiety symptoms in the Hispanic Community Health Study/Study of Latinos.Identifying genetic variants that affect viability in large cohorts.A guide to genome-wide association analysis and post-analytic interrogation.PLATO software provides analytic framework for investigating complexity beyond genome-wide association studies Heritable genotype contrast mining reveals novel gene associations specific to autism subgroups.msgbsR: An R package for analysing methylation-sensitive restriction enzyme sequencing data.Genome-wide variant by serum urate interaction in Parkinson's disease.Inbreeding estimates in human populations: Applying new approaches to an admixed Brazilian isolate.Interactions Between Genetic Variants and Environmental Factors Affect Risk of Esophageal Adenocarcinoma and Barrett's Esophagus.Surgical necrotizing enterocolitis in extremely premature neonates is associated with genetic variations in an intergenic region of chromosome eight.Genome-Wide Association Mapping Uncovers Fw1, a Dominant Gene Conferring Resistance to Fusarium Wilt in Strawberry.Rare germline variants in DNA repair genes and the angiogenesis pathway predispose prostate cancer patients to develop metastatic disease

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P2860

GWASTools: an R/Bioconductor package for quality control and analysis of genome-wide association studies.

http://www.wikidata.org/entity/Q34439401

description

2012 nî lūn-bûn

@nan

2012 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի հոտեմբերին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年论文

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Caitlin P McHugh

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Cathy C Laurie

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Cecelia A Laurie

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David Levine

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David R Crosslin

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Jess Shen

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Kenneth Rice

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Rohit Swarnkar

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Thomas Lumley

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Tushar Bhangale

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P2860

Detectable clonal mosaicism from birth to old age and its relationship to cancer

The Gene, Environment Association Studies consortium (GENEVA): maximizing the knowledge obtained from GWAS by collaboration across studies of multiple conditions

Quality control and quality assurance in genotypic data for genome-wide association studies.

A high-performance computing toolset for relatedness and principal component analysis of SNP data.

A faster circular binary segmentation algorithm for the analysis of array CGH data.

High-resolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping.

Mechanisms of mosaicism, chimerism and uniparental disomy identified by single nucleotide polymorphism array analysis.

An R package for analysis of whole-genome association studies.

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3329-3331

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scholarly article

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10.1093/BIOINFORMATICS/BTS610

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24

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28

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Tushar Bhangale

Stephanie M. Gogarten

Matthew P Conomos

P577

2012-10-10T00:00:00Z

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232228776

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23052040

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P921

genome-wide association study

quality control

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3519456

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