TransRate: reference-free quality assessment of de novo transcriptome assemblies.
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Combined de novo and genome guided assembly and annotation of the Pinus patula juvenile shoot transcriptomeBlubber transcriptome response to acute stress axis activation involves transient changes in adipogenesis and lipolysis in a fasting-adapted marine mammal.Widespread patterns of sexually dimorphic gene expression in an avian hypothalamic-pituitary-gonadal (HPG) axis.Gene expression plasticity across hosts of an invasive scale insect species.Transcriptomics technologies.De novo transcriptome analysis and glucosinolate profiling in watercress (Nasturtium officinale R. Br.).De novo transcriptome assemblies of four xylem sap-feeding insects.Characterizing the reproductive transcriptomic correlates of acute dehydration in males in the desert-adapted rodent, Peromyscus eremicus.A high-quality annotated transcriptome of swine peripheral blood.Differential Expression of Hepatic Genes of the Greater Horseshoe Bat (Rhinolophus ferrumequinum) between the Summer Active and Winter Torpid StatesTranscriptome of the Caribbean stony coral Porites astreoides from three developmental stages.De Novo Transcriptome Assembly and Sex-Biased Gene Expression in the Cyclical Parthenogenetic Daphnia galeata.Improved annotation with de novo transcriptome assembly in four social amoeba species.The transcriptional landscape of seasonal coat colour moult in the snowshoe hare.Characterizing the adult and larval transcriptome of the multicolored Asian lady beetle, Harmonia axyridisSequencing, de novo assembly and annotation of a pink bollworm larval midgut transcriptome.Characterization of a male reproductive transcriptome for Peromyscus eremicus (Cactus mouse).Transcriptional signatures of somatic neoblasts and germline cells in Macrostomum lignano.Brain transcriptomes of harbor seals demonstrate gene expression patterns of animals undergoing a metabolic disease and a viral infection.Range expansion underlies historical introgressive hybridization in the Iberian hare.Compacting and correcting Trinity and Oases RNA-Seq de novo assemblies.Playing hide and seek with repeats in local and global de novo transcriptome assembly of short RNA-seq reads.Comparative transcriptome analysis reveals differentially expressed genes associated with sex expression in garden asparagus (Asparagus officinalis).Development of novel genic microsatellite markers from transcriptome sequencing in sugar maple (Acer saccharum Marsh.).Sialotranscriptomics of Rhipicephalus zambeziensis reveals intricate expression profiles of secretory proteins and suggests tight temporal transcriptional regulation during blood-feeding.Increased taxon sampling reveals thousands of hidden orthologs in flatworms.High-quality reference transcript datasets hold the key to transcript-specific RNA-sequencing analysis in plants.De novo transcriptome assemblies of four accessions of the metal hyperaccumulator plant Noccaea caerulescens.Desiccation tolerance in bryophytes: The dehydration and rehydration transcriptomes in the desiccation-tolerant bryophyte Bryum argenteum.Transcriptome characterisation and simple sequence repeat marker discovery in the seagrass Posidonia oceanica.Severe acute dehydration in a desert rodent elicits a transcriptional response that effectively prevents kidney injury.De novo transcriptome assembly for the spiny mouse (Acomys cahirinus).The first transcriptome of Italian wall lizard, a new tool to infer about the Island Syndrome.RNA-Seq de novo assembly and differential transcriptome analysis of the nematode Ascaridia galli in relation to in vivo exposure to flubendazole.Female mimicry by sneaker males has a transcriptomic signature in both the brain and gonad in a sex changing fish.Mountain hare transcriptome and diagnostic markers as resources to monitor hybridization with European hares.The maternal-zygotic transition and zygotic activation of the Mnemiopsis leidyi genome occurs within the first three cleavage cycles.The Transcriptomes of Xiphinema index and Longidorus elongatus Suggest Independent Acquisition of Some Plant Parasitism Genes by Horizontal Gene Transfer in Early-Branching Nematodes.Signal, Uncertainty, and Conflict in Phylogenomic Data for a Diverse Lineage of Microbial Eukaryotes (Diatoms, Bacillariophyta).De Novo Transcriptome Assembly in Polyploid Species.
P2860
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P2860
TransRate: reference-free quality assessment of de novo transcriptome assemblies.
description
2016 nî lūn-bûn
@nan
2016 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2016 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2016年の論文
@ja
2016年論文
@yue
2016年論文
@zh-hant
2016年論文
@zh-hk
2016年論文
@zh-mo
2016年論文
@zh-tw
2016年论文
@wuu
name
TransRate: reference-free quality assessment of de novo transcriptome assemblies.
@ast
TransRate: reference-free quality assessment of de novo transcriptome assemblies.
@en
TransRate: reference-free quality assessment of de novo transcriptome assemblies.
@nl
type
label
TransRate: reference-free quality assessment of de novo transcriptome assemblies.
@ast
TransRate: reference-free quality assessment of de novo transcriptome assemblies.
@en
TransRate: reference-free quality assessment of de novo transcriptome assemblies.
@nl
prefLabel
TransRate: reference-free quality assessment of de novo transcriptome assemblies.
@ast
TransRate: reference-free quality assessment of de novo transcriptome assemblies.
@en
TransRate: reference-free quality assessment of de novo transcriptome assemblies.
@nl
P2093
P2860
P356
P1433
P1476
TransRate: reference-free quality assessment of de novo transcriptome assemblies.
@en
P2093
Chris Boursnell
Julian M Hibberd
Richard Smith-Unna
Steven Kelly
P2860
P304
P356
10.1101/GR.196469.115
P577
2016-06-01T00:00:00Z