A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets.
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Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome AnalysisTowards predictive models of the human gut microbiomeA fibrolytic potential in the human ileum mucosal microbiota revealed by functional metagenomicUtilizing de Bruijn graph of metagenome assembly for metatranscriptome analysisDetection of somatic mutations in tumors using unaligned clonal sequencing data.Characterization of CRISPR RNA transcription by exploiting stranded metatranscriptomic data.Assessing the Metabolic Diversity of Streptococcus from a Protein Domain Point of View.Metagenomics: The Next Culture-Independent Game Changer.A systematic analysis of biosynthetic gene clusters in the human microbiome reveals a common family of antibiotics.Systematic genomic analysis reveals the complementary aerobic and anaerobic respiration capacities of the human gut microbiotaThe composition of the gut microbiota throughout life, with an emphasis on early life.Molecular ecological tools to decipher the role of our microbial mass in obesity.Mining microbial metatranscriptomes for expression of antibiotic resistance genes under natural conditionsFunctional Profiling of Unfamiliar Microbial Communities Using a Validated De Novo Assembly Metatranscriptome Pipeline.Inner workings of thrombolites: spatial gradients of metabolic activity as revealed by metatranscriptome profiling.Analysis of the metatranscriptome of microbial communities of an alkaline hot sulfur spring revealed different gene encoding pathway enzymes associated with energy metabolism.COMAN: a web server for comprehensive metatranscriptomics analysisSAMSA: a comprehensive metatranscriptome analysis pipeline.IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses.A fast and robust protocol for metataxonomic analysis using RNAseq data.Bioinformatics tools for quantitative and functional metagenome and metatranscriptome data analysis in microbes.Genomic Analysis of the Human Gut Microbiome Suggests Novel Enzymes Involved in Quinone Biosynthesis.Genome-wide transcriptional responses of Alteromonas naphthalenivorans SN2 to contaminated seawater and marine tidal flat sediment.MetaTrans: an open-source pipeline for metatranscriptomics.Genetic Determinants of the Gut Microbiome in UK Twins.Alignment-free Transcriptomic and Metatranscriptomic Comparison Using Sequencing Signatures with Variable Length Markov Chains.Omics approaches in food safety: fulfilling the promise?High-resolution characterization of the human microbiome.FunctionAnnotator, a versatile and efficient web tool for non-model organism annotation.metaModules identifies key functional subnetworks in microbiome-related disease.Genomic and functional analysis of Romboutsia ilealis CRIBT reveals adaptation to the small intestine.MetaComp: comprehensive analysis software for comparative meta-omics including comparative metagenomics.TaxMapper: an analysis tool, reference database and workflow for metatranscriptome analysis of eukaryotic microorganisms.Strand-specific community RNA-seq reveals prevalent and dynamic antisense transcription in human gut microbiota.Technical challenges in metatranscriptomic studies applied to the bacterial communities of freshwater ecosystems.The human gut microbiome and its dysfunctions through the meta-omics prism.Microbial Ecology along the Gastrointestinal Tract.An Introductory "How-to" Guide for Incorporating Microbiome Research into Integrative and Comparative Biology.Taxonomy of anaerobic digestion microbiome reveals biases associated with the applied high throughput sequencing strategies.Current Knowledge and Computational Techniques for Grapevine Meta-Omics Analysis.
P2860
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P2860
A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets.
description
2013 nî lūn-bûn
@nan
2013 թուականի Օգոստոսին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի օգոստոսին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
name
A comprehensive metatranscript ...... intestine microbiota datasets.
@ast
A comprehensive metatranscript ...... intestine microbiota datasets.
@en
A comprehensive metatranscript ...... intestine microbiota datasets.
@nl
type
label
A comprehensive metatranscript ...... intestine microbiota datasets.
@ast
A comprehensive metatranscript ...... intestine microbiota datasets.
@en
A comprehensive metatranscript ...... intestine microbiota datasets.
@nl
prefLabel
A comprehensive metatranscript ...... intestine microbiota datasets.
@ast
A comprehensive metatranscript ...... intestine microbiota datasets.
@en
A comprehensive metatranscript ...... intestine microbiota datasets.
@nl
P2093
P2860
P50
P356
P1433
P1476
A comprehensive metatranscript ...... intestine microbiota datasets.
@en
P2093
Eddy J Smid
Erwin G Zoetendal
Javier Ramiro-Garcia
Jos Boekhorst
Milkha M Leimena
P2860
P356
10.1186/1471-2164-14-530
P407
P577
2013-08-02T00:00:00Z