The influence of gene flow on species tree estimation: a simulation study. - Wikidata - awgldk - TriplyDB

The influence of gene flow on species tree estimation: a simulation study.

The influence of gene flow on species tree estimation: a simulation study.

http://www.wikidata.org/entity/Q34941042

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Data concatenation, Bayesian concordance and coalescent-based analyses of the species tree for the rapid radiation of Triturus newts Multilocus inference of species trees and DNA barcoding Genetic Structure and Evolutionary History of Three Alpine Sclerophyllous Oaks in East Himalaya-Hengduan Mountains and Adjacent Regions Evolutionary relationships within the lamioid tribe Synandreae (Lamiaceae) based on multiple low-copy nuclear loci Multilocus Phylogeography and Species Delimitation in the Cumberland Plateau Salamander, Plethodon kentucki: Incongruence among Data Sets and Methods Genetic variation in the green anole lizard (Anolis carolinensis) reveals island refugia and a fragmented Florida during the quaternary Computational Performance and Statistical Accuracy of *BEAST and Comparisons with Other Methods Multilocus species trees and species delimitation in a temporal context: application to the water shrews of the genus Neomys Disentangling the relationship of the Australian marsupial orders using retrotransposon and evolutionary network analyses Multilocus species trees show the recent adaptive radiation of the mimetic heliconius butterflies Bears in a forest of gene trees: phylogenetic inference is complicated by incomplete lineage sorting and gene flow Estimating phylogenetic trees from genome-scale data.Comparative Population Genomics of African Montane Forest Mammals Support Population Persistence across a Climatic Gradient and Quaternary Climatic Cycles.Phylogeographic breaks within Asian butternuts indicate the existence of a phytogeographic divide in East Asia.Genome-wide SNP data suggest complex ancestry of sympatric North Pacific killer whale ecotypes The complex phylogeography of the Indo-Malayan Alophoixus bulbuls with the description of a putative new ring species complex.Phylogeography of Ramalina menziesii, a widely distributed lichen-forming fungus in western North America.Effects of asymmetric nuclear introgression, introgressive mitochondrial sweep, and purifying selection on phylogenetic reconstruction and divergence estimates in the Pacific clade of Locustella warblers.Gene prediction and annotation in Penstemon (Plantaginaceae): A workflow for marker development from extremely low-coverage genome sequencing.Estimating the temporal and spatial extent of gene flow among sympatric lizard populations (genus Sceloporus) in the southern Mexican highlands.Biogeographic history and cryptic diversity of saxicolous Tropiduridae lizards endemic to the semiarid Caatinga.Historical introgression among the American live oaks and the comparative nature of tests for introgression.Comparing species tree estimation with large anchored phylogenomic and small Sanger-sequenced molecular datasets: an empirical study on Malagasy pseudoxyrhophiine snakes.A scalability study of phylogenetic network inference methods using empirical datasets and simulations involving a single reticulation.How reticulated are species?Evaluating mechanisms of diversification in a Guineo-Congolian tropical forest frog using demographic model selection.Phylogeographic inference using Bayesian model comparison across a fragmented chorus frog species complex.Pan-African phylogeography of a model organism, the African clawed frog 'Xenopus laevis'.Speciation with Gene Flow in North American Myotis Bats.Genomic evidence for polyphyletic origins and interlineage gene flow within complex taxa: a case study of Picea brachytyla in the Qinghai-Tibet Plateau.Disentangling Incomplete Lineage Sorting and Introgression to Refine Species-Tree Estimates for Lake Tanganyika Cichlid Fishes.Maintenance of Species Boundaries Despite Ongoing Gene Flow in Ragworts.Posterior predictive checks of coalescent models: P2C2M, an R package.Bees explain floral variation in a recent radiation of Linaria.Consistency and inconsistency of consensus methods for inferring species trees from gene trees in the presence of ancestral population structure Extensive gene tree discordance and hemiplasy shaped the genomes of North American columnar cacti.Phylogeography Study of the Siberian Apricot (Prunus sibirica L.) in Northern China Assessed by Chloroplast Microsatellite and DNA Makers.Coalescent-based analyses of genomic sequence data provide a robust resolution of phylogenetic relationships among major groups of gibbons.Why Concatenation Fails Near the Anomaly Zone.Impact of Model Violations on the Inference of Species Boundaries Under the Multispecies.

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P2860

The influence of gene flow on species tree estimation: a simulation study.

http://www.wikidata.org/entity/Q34941042

description

2013 nî lūn-bûn

@nan

2013 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2013 թվականի օգոստոսին հրատարակված գիտական հոդված

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2013年の論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年论文

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name

The influence of gene flow on species tree estimation: a simulation study.

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The influence of gene flow on species tree estimation: a simulation study.

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The influence of gene flow on species tree estimation: a simulation study.

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The influence of gene flow on species tree estimation: a simulation study.

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The influence of gene flow on species tree estimation: a simulation study.

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The influence of gene flow on species tree estimation: a simulation study.

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The influence of gene flow on species tree estimation: a simulation study.

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The influence of gene flow on species tree estimation: a simulation study.

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Systematic Biology

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The influence of gene flow on species tree estimation: a simulation study.

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Adam D Leaché

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Bruce Rannala

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Rebecca B Harris

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Ziheng Yang

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P2860

Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags

A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Bayesian species delimitation using multilocus sequence data

Generating samples under a Wright-Fisher neutral model of genetic variation

Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis

Bayesian inference of species trees from multilocus data

AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics

Gene tree discordance, phylogenetic inference and the multispecies coalescent

Is a new and general theory of molecular systematics emerging?

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17-30

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10.1093/SYSBIO/SYT049

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63

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