Deconvolution and database search of complex tandem mass spectra of intact proteins: a combinatorial approach - Wikidata - awgldk - TriplyDB

Deconvolution and database search of complex tandem mass spectra of intact proteins: a combinatorial approach

Deconvolution and database search of complex tandem mass spectra of intact proteins: a combinatorial approach

http://www.wikidata.org/entity/Q35006996

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Top-down proteomics in health and disease: challenges and opportunities Biochemical, transcriptomic and proteomic analyses of digestion in the scorpion Tityus serrulatus: insights into function and evolution of digestion in an ancient arthropod Identification of ultramodified proteins using top-down tandem mass spectra.Isotope pattern deconvolution for peptide mass spectrometry by non-negative least squares/least absolute deviation template matching MASH Suite: a user-friendly and versatile software interface for high-resolution mass spectrometry data interpretation and visualization Preprocessing significantly improves the peptide/protein identification sensitivity of high-resolution isobarically labeled tandem mass spectrometry data Bioinformatics Analysis of Top-Down Mass Spectrometry Data with ProSight Lite.Capillary zone electrophoresis-electrospray ionization-tandem mass spectrometry for top-down characterization of the Mycobacterium marinum secretome.Spectral probabilities of top-down tandem mass spectra An algorithm for identifying multiply modified endogenous proteins using both full-scan and high-resolution tandem mass spectrometric data.Top-down proteomics reveals concerted reductions in myofilament and Z-disc protein phosphorylation after acute myocardial infarction.Top-down mass spectrometry of cardiac myofilament proteins in health and disease.A new scoring function for top-down spectral deconvolution.Pathway analysis and transcriptomics improve protein identification by shotgun proteomics from samples comprising small number of cells--a benchmarking study.Coupling capillary zone electrophoresis with electron transfer dissociation and activated ion electron transfer dissociation for top-down proteomics Features-based deisotoping method for tandem mass spectra.Improving collision induced dissociation (CID), high energy collision dissociation (HCD), and electron transfer dissociation (ETD) fourier transform MS/MS degradome-peptidome identifications using high accuracy mass information Protein identification using top-down.MASH Suite Pro: A Comprehensive Software Tool for Top-Down Proteomics.Elucidating Proteoform Families from Proteoform Intact-Mass and Lysine-Count Measurements.Fast top-down intact protein characterization with capillary zone electrophoresis-electrospray ionization tandem mass spectrometry.Profiling of integral membrane proteins and their post translational modifications using high-resolution mass spectrometry.The proteomic future: where mass spectrometry should be taking us.Current methods for global proteome identification.High-Resolution Parallel Reaction Monitoring with Electron Transfer Dissociation for Middle-Down Proteomics: An Application to Study the Quantitative Changes Induced by Histone Modifying Enzyme Inhibitors and Activators.Informed-Proteomics: open-source software package for top-down proteomics.Myofibrillar Z-discs Are a Protein Phosphorylation Hot Spot with Protein Kinase C (PKCα) Modulating Protein Dynamics.Bioinformatics Tools for Genome-Wide Epigenetic Research.A mass graph-based approach for the identification of modified proteoforms using top-down tandem mass spectra.Top-down Proteomics: Technology Advancements and Applications to Heart Diseases.Top-down analysis of immunoglobulin G isotypes 1 and 2 with electron transfer dissociation on a high-field Orbitrap mass spectrometer.Top-Down Mass Spectrometry: Proteomics to Proteoforms.De Novo Sequencing of Top-Down Tandem Mass Spectra: A Next Step towards Retrieving a Complete Protein Sequence.Middle-down proteomics: a still unexploited resource for chromatin biology.Automatic annotation and visualization tool for mass spectrometry-based glycomics.TopPIC: a software tool for top-down mass spectrometry-based proteoform identification and characterization.Top-down analysis of protein samples by de novo sequencing techniques.Accurate and Efficient Resolution of Overlapping Isotopic Envelopes in Protein Tandem Mass Spectra.Three dimensional liquid chromatography coupling ion exchange chromatography/hydrophobic interaction chromatography/reverse phase chromatography for effective protein separation in top-down proteomics.Coupling Capillary Zone Electrophoresis to a Q Exactive HF Mass Spectrometer for Top-down Proteomics: 580 Proteoform Identifications from Yeast.

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P2860

Deconvolution and database search of complex tandem mass spectra of intact proteins: a combinatorial approach

http://www.wikidata.org/entity/Q35006996

description

2010 nî lūn-bûn

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2010 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի սեպտեմբերին հրատարակված գիտական հոդված

@hy

2010年の論文

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2010年論文

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2010年論文

@zh-hant

2010年論文

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2010年論文

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2010年論文

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2010年论文

@wuu

name

Deconvolution and database sea ...... eins: a combinatorial approach

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Deconvolution and database sea ...... eins: a combinatorial approach

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type

label

Deconvolution and database sea ...... eins: a combinatorial approach

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Deconvolution and database sea ...... eins: a combinatorial approach

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prefLabel

Deconvolution and database sea ...... eins: a combinatorial approach

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Deconvolution and database sea ...... eins: a combinatorial approach

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Molecular & Cellular Proteomics

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Deconvolution and database sea ...... eins: a combinatorial approach

@en

P2093

Colin Wynne

http://www.w3.org/2001/XMLSchema#string

Nathan Edwards

http://www.w3.org/2001/XMLSchema#string

Pavel A Pevzner

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Pieter C Dorrestein

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Puneet Souda

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Xiaowen Liu

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Yuval Inbar

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P2860

Top-down mass spectrometry of a 29-kDa protein for characterization of any posttranslational modification to within one residue

Top-down mass spectrometry of integral membrane proteins

Primary sequence information from intact proteins by electrospray ionization tandem mass spectrometry.

Improving protein identification from peptide mass fingerprinting through a parameterized multi-level scoring algorithm and an optimized peak detection.

Processing complex mixtures of intact proteins for direct analysis by mass spectrometry.

An automated method for the analysis of stable isotope labeling data in proteomics.

Automatic poisson peak harvesting for high throughput protein identification.

Modular, scriptable and automated analysis tools for high-throughput peptide mass fingerprinting.

Isotopic peak intensity ratio based algorithm for determination of isotopic clusters and monoisotopic masses of polypeptides from high-resolution mass spectrometric data.

NITPICK: peak identification for mass spectrometry data

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2772-2782

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scholarly article

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10.1074/MCP.M110.002766

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12

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9

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Julian P Whitelegge

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2010-09-20T00:00:00Z

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20855543

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3101958

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