Nonpareil: a redundancy-based approach to assess the level of coverage in metagenomic datasets.
about
Recovering complete and draft population genomes from metagenome datasetsComparative metagenomics reveals taxonomically idiosyncratic yet functionally congruent communities in periodontitisMetagenomics Reveals Pervasive Bacterial Populations and Reduced Community Diversity across the Alaska Tundra EcosystemSoil microbial community responses to a decade of warming as revealed by comparative metagenomics.Estimating coverage in metagenomic data sets and why it matters.Arsenic metabolism in high altitude modern stromatolites revealed by metagenomic analysis.Microbial metabolic potential for carbon degradation and nutrient (nitrogen and phosphorus) acquisition in an ombrotrophic peatlandComparative Metagenomics of the Polymicrobial Black Band Disease of Corals.Assembling metagenomes, one community at a time.(Meta)genomic insights into the pathogenome of Cellulosimicrobium cellulans.Moleculo Long-Read Sequencing Facilitates Assembly and Genomic Binning from Complex Soil Metagenomes.Strengths and limitations of 16S rRNA gene amplicon sequencing in revealing temporal microbial community dynamics.Microbial community successional patterns in beach sands impacted by the Deepwater Horizon oil spill.Strong spurious transcription likely contributes to DNA insert bias in typical metagenomic clone librariesArchaeal and bacterial community dynamics and bioprocess performance of a bench-scale two-stage anaerobic digester.Comparative metagenomics unveils functions and genome features of microbialite-associated communities along a depth gradient.MetLab: An In Silico Experimental Design, Simulation and Analysis Tool for Viral Metagenomics Studies.Draft genome sequence of Halomonas meridiana R1t3 isolated from the surface microbiota of the Caribbean Elkhorn coral Acropora palmata.Identification of the Core Set of Carbon-Associated Genes in a Bioenergy Grassland SoilQuantifying the Importance of the Rare Biosphere for Microbial Community Response to Organic Pollutants in a Freshwater Ecosystem.Complementary Metaproteomic Approaches to Assess the Bacterioplankton Response toward a Phytoplankton Spring Bloom in the Southern North Sea.Elucidation of Taste- and Odor-Producing Bacteria and Toxigenic Cyanobacteria in a Midwestern Drinking Water Supply Reservoir by Shotgun Metagenomic Analysis.Differential Functional Constraints Cause Strain-Level Endemism in Polynucleobacter PopulationsThe low diverse gastric microbiome of the jellyfish Cotylorhiza tuberculata is dominated by four novel taxa.From virus isolation to metagenome generation for investigating viral diversity in deep-sea sediments.The molecular ecology of Microcystis sp. blooms in the San Francisco Estuary.Distribution and microbial community structure analysis of a single-stage partial nitritation/anammox granular sludge bioreactor operating at low temperature.Anthropogenic effects on bacterial diversity and function along a river-to-estuary gradient in Northwest Greece revealed by metagenomics.Isolation and metagenomic characterization of bacteria associated with calcium carbonate and struvite precipitation in a pure moving bed biofilm reactor-membrane bioreactor.Linkage of microbial kinetics and bacterial community structure of MBR and hybrid MBBR-MBR systems to treat salinity-amended urban wastewater.Impact of methionine on a partial-nitritation biofilter.16S rRNA gene-based characterization of bacteria potentially associated with phosphate and carbonate precipitation from a granular autotrophic nitrogen removal bioreactor.The Impact of the Diurnal Cycle on the Microbial Transcriptome in the Rhizosphere of Barley.Process performance and bacterial community dynamics of partial-nitritation biofilters subjected to different concentrations of cysteine amino acid.Metabolic capability and in situ activity of microorganisms in an oil reservoir.Acetoclastic Methanosaeta are dominant methanogens in organic-rich Antarctic marine sediments.Year-round shotgun metagenomes reveal stable microbial communities in agricultural soils and novel ammonia oxidizers responding to fertilization.Microbial ecology of full-scale wastewater treatment systems in the Polar Arctic Circle: Archaea, Bacteria and Fungi.Community structure explains antibiotic resistance gene dynamics over a temperature gradient in soil.Nonpareil 3: Fast Estimation of Metagenomic Coverage and Sequence Diversity.
P2860
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P2860
Nonpareil: a redundancy-based approach to assess the level of coverage in metagenomic datasets.
description
2013 nî lūn-bûn
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2013 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի հոտեմբերին հրատարակված գիտական հոդված
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2013年の論文
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2013年学术文章
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2013年学术文章
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2013年学术文章
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2013年学术文章
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2013年学术文章
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2013年學術文章
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name
Nonpareil: a redundancy-based ...... erage in metagenomic datasets.
@ast
Nonpareil: a redundancy-based ...... erage in metagenomic datasets.
@en
type
label
Nonpareil: a redundancy-based ...... erage in metagenomic datasets.
@ast
Nonpareil: a redundancy-based ...... erage in metagenomic datasets.
@en
prefLabel
Nonpareil: a redundancy-based ...... erage in metagenomic datasets.
@ast
Nonpareil: a redundancy-based ...... erage in metagenomic datasets.
@en
P2860
P356
P1433
P1476
Nonpareil: a redundancy-based ...... erage in metagenomic datasets.
@en
P2093
Konstantinos T Konstantinidis
P2860
P304
P356
10.1093/BIOINFORMATICS/BTT584
P407
P577
2013-10-11T00:00:00Z