RefSeq microbial genomes database: new representation and annotation strategy. - Wikidata - awgldk - TriplyDB

RefSeq microbial genomes database: new representation and annotation strategy.

RefSeq microbial genomes database: new representation and annotation strategy.

http://www.wikidata.org/entity/Q35062314

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Divergences in gene repertoire among the reference Prevotella genomes derived from distinct body sites of human Representing and querying disease networks using graph databases The power of operon rearrangements for predicting functional associations Insights into novel antimicrobial compounds and antibiotic resistance genes from soil metagenomes CCAAT/enhancer binding protein β in relation to ER stress, inflammation, and metabolic disturbances Of linkers and autochaperones: an unambiguous nomenclature to identify common and uncommon themes for autotransporter secretion.SMRT sequencing of the Campylobacter coli BfR-CA-9557 genome sequence reveals unique methylation motifs.Enhancement of Microbial Biodesulfurization via Genetic Engineering and Adaptive Evolution How Archiving by Freezing Affects the Genome-Scale Diversity of Escherichia coli Populations Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil NCBI prokaryotic genome annotation pipeline Design of a Split Intein with Exceptional Protein Splicing Activity eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences Comparative Genomic Analysis of Sulfurospirillum cavolei MES Reconstructed from the Metagenome of an Electrosynthetic Microbiome.MBGD update 2015: microbial genome database for flexible ortholog analysis utilizing a diverse set of genomic data.High-quality draft genome sequences of five anaerobic oral bacteria and description of Peptoanaerobacter stomatis gen. nov., sp. nov., a new member of the family Peptostreptococcaceae.Description of a novel pectin-degrading bacterial species Prevotella pectinovora sp. nov., based on its phenotypic and genomic traits.Data from computational analysis of the peptide linkers in the MocR bacterial transcriptional regulators.Comparative analysis of the predicted secretomes of Rosaceae scab pathogens Venturia inaequalis and V. pirina reveals expanded effector families and putative determinants of host range.Microbial community profiling of human saliva using shotgun metagenomic sequencing.Three novel Pseudomonas phages isolated from composting provide insights into the evolution and diversity of tailed phages.In silico approach to designing rational metagenomic libraries for functional studies.lncRNA-screen: an interactive platform for computationally screening long non-coding RNAs in large genomics datasets.Lateral Gene Transfer Dynamics in the Ancient Bacterial Genus Streptomyces.Draft Genome Sequence of Geobacter pelophilus Strain Dfr2, a Ferric Iron-Reducing Bacterium.The Enterococcus faecalis virulence factor ElrA interacts with the human Four-and-a-Half LIM Domains Protein 2 Assessment of genome annotation using gene function similarity within the gene neighborhood.Draft Genome Sequence of the Yeast Pseudozyma antarctica Type Strain JCM10317, a Producer of the Glycolipid Biosurfactants, Mannosylerythritol Lipids.Identification of a novel nucleocytoplasmic shuttling RNA helicase of trypanosomes.Comparative metagenomic analyses reveal viral-induced shifts of host metabolism towards nucleotide biosynthesis.The genome of the intracellular bacterium of the coastal bivalve, Solemya velum: a blueprint for thriving in and out of symbiosis.Unique genomic arrangements in an invasive serotype M23 strain of Streptococcus pyogenes identify genes that induce hypervirulence.The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes.Quickly finding orthologs as reciprocal best hits with BLAT, LAST, and UBLAST: how much do we miss?Gene: a gene-centered information resource at NCBI.Update on RefSeq microbial genomes resources.The tmRNA website.Expanded microbial genome coverage and improved protein family annotation in the COG database.Average genome size estimation improves comparative metagenomics and sheds light on the functional ecology of the human microbiome Genomic analysis of a ginger pathogen Bacillus pumilus providing the understanding to the pathogenesis and the novel control strategy.

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P2860

RefSeq microbial genomes database: new representation and annotation strategy.

http://www.wikidata.org/entity/Q35062314

description

2013 nî lūn-bûn

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2013 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2013 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2013年の論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年论文

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name

RefSeq microbial genomes database: new representation and annotation strategy.

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RefSeq microbial genomes database: new representation and annotation strategy.

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RefSeq microbial genomes database: new representation and annotation strategy.

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RefSeq microbial genomes database: new representation and annotation strategy.

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RefSeq microbial genomes database: new representation and annotation strategy.

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RefSeq microbial genomes database: new representation and annotation strategy.

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RefSeq microbial genomes database: new representation and annotation strategy.

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Boris Fedorov

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Igor Tolstoy

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Kathleen O'Neill

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Stacy Ciufo

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P2860

The Sequence Ontology: a tool for the unification of genome annotations

BLAST+: architecture and applications

Insights into the phylogeny and coding potential of microbial dark matter

Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes

Computational meta'omics for microbial community studies

Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

Routine use of microbial whole genome sequencing in diagnostic and public health microbiology

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

Complete genomes in WWW Entrez: data representation and analysis.

The Sequence Read Archive: explosive growth of sequencing data.

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10.1093/NAR/GKT1274

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42

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Tatiana Tatusova

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