piPipes: a set of pipelines for piRNA and transposon analysis via small RNA-seq, RNA-seq, degradome- and CAGE-seq, ChIP-seq and genomic DNA sequencing
about
Noncoding RNA: Current Deep Sequencing Data Analysis Approaches and Challenges.iSmaRT: a toolkit for a comprehensive analysis of small RNA-Seq data.Noncoding RNA. piRNA-guided transposon cleavage initiates Zucchini-dependent, phased piRNA productionCo-chaperone Hsp70/Hsp90-organizing protein (Hop) is required for transposon silencing and Piwi-interacting RNA (piRNA) biogenesis.Slicing and Binding by Ago3 or Aub Trigger Piwi-Bound piRNA Production by Distinct MechanismsDual functions of Macpiwi1 in transposon silencing and stem cell maintenance in the flatworm Macrostomum lignano.Evaluation and Adaptation of a Laboratory-Based cDNA Library Preparation Protocol for Retrospective Sequencing of Archived MicroRNAs from up to 35-Year-Old Clinical FFPE Specimens.TEtranscripts: a package for including transposable elements in differential expression analysis of RNA-seq datasets.Antagonistic roles of Nibbler and Hen1 in modulating piRNA 3' ends in DrosophilaComparative Principles of DNA Methylation Reprogramming during Human and Mouse In Vitro Primordial Germ Cell Specification.Phosphate-binding pocket in Dicer-2 PAZ domain for high-fidelity siRNA production.Domestic chickens activate a piRNA defense against avian leukosis virus.Systematically evaluating interfaces for RNA-seq analysis from a life scientist perspective.Direct interrogation of the role of H3K9 in metazoan heterochromatin function.MiRNAs and piRNAs from bone marrow mesenchymal stem cell extracellular vesicles induce cell survival and inhibit cell differentiation of cord blood hematopoietic stem cells: a new insight in transplantationFYCO1 and autophagy control the integrity of the haploid male germ cell-specific RNP granules.TEtools facilitates big data expression analysis of transposable elements and reveals an antagonism between their activity and that of piRNA genes.piRNA-mediated regulation of transposon alternative splicing in the soma and germ line.The C-terminal dsRNA-binding domain of Drosophila Dicer-2 is crucial for efficient and high-fidelity production of siRNA and loading of siRNA to Argonaute2.An endosiRNA-Based Repression Mechanism Counteracts Transposon Activation during Global DNA Demethylation in Embryonic Stem Cells.Functional Redundancy of Variant and Canonical Histone H3 Lysine 9 Modification in Drosophila.The genome of the Hi5 germ cell line from Trichoplusia ni, an agricultural pest and novel model for small RNA biology.Dicer partner protein tunes the length of miRNAs using base-mismatch in the pre-miRNA stem.PNLDC1, mouse pre-piRNA Trimmer, is required for meiotic and post-meiotic male germ cell development.A Single Mechanism of Biogenesis, Initiated and Directed by PIWI Proteins, Explains piRNA Production in Most AnimalsTEsmall Identifies Small RNAs Associated With Targeted Inhibitor Resistance in Melanoma
P2860
Q31121214-201D765A-A3D6-402F-9AF8-DFD3CF1AFCB1Q31153177-7471BC45-405C-4914-9458-C12DFAFF6376Q34476516-7E707B17-3488-4D70-9DA2-3D6537B3B991Q34551160-9F2F27EC-BC7B-41B2-AF8D-BE3B1980584DQ36030238-319A3AE0-7DF3-4D1A-BDA6-8C0711F0B2A1Q36158552-0A781FC2-B2D9-4777-A69C-91B29A7EDB06Q36320751-F2128849-9AE7-4DBF-9D1F-91B085CE8F77Q36591759-F0C0D2A9-B7CE-46B9-B71C-DF1B87E83B3DQ36597414-52745E20-C82D-4B04-AEBA-7983C19DA8D9Q37340541-87A3606C-784F-46D4-A2A2-F905F1A6E91BQ37493117-A87C8B6B-7F85-43BF-8337-47A589F3B233Q37740188-5CBFC6B1-2D23-48FB-8B22-2725E60B0DE4Q38537092-A55701EA-CD0C-42B2-86CC-6116490A22AAQ41101126-D404DAE2-F8E1-4CDC-B2ED-263191828BC7Q42069315-FE99040E-2C75-45F4-B463-EF46982090F8Q42150119-1F2330DE-1D63-48A7-92B9-BD828A6B8978Q45854044-DD459419-A6FA-4062-9075-6AE2A8D115FFQ46287275-8511A1A4-4BF4-4BB0-BB3A-58219D1F4F87Q47070471-50BEF2BB-AC61-4439-B0DE-868928BDEF63Q47220380-2709C104-B092-45AB-AACC-7EAB639C79DAQ47352829-2E09A5DC-5E64-44F4-8C55-4DCA48681849Q48152776-285D5916-2584-4DAC-8883-FDD0AC88C2C7Q49650355-90EF8471-CAB2-4B8D-ABB5-D97F139A3968Q55116261-07D250A7-465D-422E-9A90-F8CACD5F0C2EQ56887532-9D7B8737-A3F7-45BD-BECA-05B9D945B095Q57817921-C6A219A3-6238-4FA8-A631-01C03B4E36D1
P2860
piPipes: a set of pipelines for piRNA and transposon analysis via small RNA-seq, RNA-seq, degradome- and CAGE-seq, ChIP-seq and genomic DNA sequencing
description
2014 nî lūn-bûn
@nan
2014 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2014 թվականի հոտեմբերին հրատարակված գիտական հոդված
@hy
2014年の論文
@ja
2014年論文
@yue
2014年論文
@zh-hant
2014年論文
@zh-hk
2014年論文
@zh-mo
2014年論文
@zh-tw
2014年论文
@wuu
name
piPipes: a set of pipelines fo ...... seq and genomic DNA sequencing
@ast
piPipes: a set of pipelines fo ...... seq and genomic DNA sequencing
@en
type
label
piPipes: a set of pipelines fo ...... seq and genomic DNA sequencing
@ast
piPipes: a set of pipelines fo ...... seq and genomic DNA sequencing
@en
prefLabel
piPipes: a set of pipelines fo ...... seq and genomic DNA sequencing
@ast
piPipes: a set of pipelines fo ...... seq and genomic DNA sequencing
@en
P2860
P356
P1433
P1476
piPipes: a set of pipelines fo ...... seq and genomic DNA sequencing
@en
P2093
Zhiping Weng
P2860
P304
P356
10.1093/BIOINFORMATICS/BTU647
P407
P577
2014-10-17T00:00:00Z