MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences. - Wikidata - awgldk - TriplyDB

MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences.

MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences.

http://www.wikidata.org/entity/Q35109643

about

Web Resources for Metagenomics Studies Integrative workflows for metagenomic analysis Integrative microbial community analysis reveals full-scale enhanced biological phosphorus removal under tropical conditions Metagenomics Reveals Pervasive Bacterial Populations and Reduced Community Diversity across the Alaska Tundra Ecosystem SAR11 bacteria linked to ocean anoxia and nitrogen loss.Metagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies.Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics.Strengths and limitations of 16S rRNA gene amplicon sequencing in revealing temporal microbial community dynamics.Microbial community successional patterns in beach sands impacted by the Deepwater Horizon oil spill.Evaluation of metatranscriptomic protocols and application to the study of freshwater microbial communities.MetAnnotate: function-specific taxonomic profiling and comparison of metagenomes.Analysis of the microbiome: Advantages of whole genome shotgun versus 16S amplicon sequencing.Biofilms on Hospital Shower Hoses: Characterization and Implications for Nosocomial Infections.Unbiased probabilistic taxonomic classification for DNA barcoding.MetaStorm: A Public Resource for Customizable Metagenomics Annotation.Quantifying the Importance of the Rare Biosphere for Microbial Community Response to Organic Pollutants in a Freshwater Ecosystem.Draft Genome Sequences of Four Bacterial Strains Isolated from a Polymicrobial Culture of Naked (N-Type) Emiliania huxleyi CCMP1516.A clinician's guide to microbiome analysis.VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data Metatranscriptomic analysis of prokaryotic communities active in sulfur and arsenic cycling in Mono Lake, California, USA.LotuS: an efficient and user-friendly OTU processing pipeline.Metagenomic analysis provides insights into functional capacity in a hyperarid desert soil niche community.Metagenomic analysis of rapid gravity sand filter microbial communities suggests novel physiology of Nitrospira spp.Anthropogenic effects on bacterial diversity and function along a river-to-estuary gradient in Northwest Greece revealed by metagenomics.Metagenome fragment classification based on multiple motif-occurrence profiles.Draft Genome Sequences of Seven Bacterial Strains Isolated from a Polymicrobial Culture of Coccolith-Bearing (C-Type) Emiliania huxleyi M217.Ammonia-oxidising archaea living at low pH: Insights from comparative genomics.Gene and genome-centric analyses of koala and wombat fecal microbiomes point to metabolic specialization for Eucalyptus digestion.Metagenomics Reveals the Impact of Wastewater Treatment Plants on the Dispersal of Microorganisms and Genes in Aquatic Sediments.Year-round shotgun metagenomes reveal stable microbial communities in agricultural soils and novel ammonia oxidizers responding to fertilization.Comparative genomics sheds light on niche differentiation and the evolutionary history of comammox Nitrospira.Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.AAI-profiler: fast proteome-wide exploratory analysis reveals taxonomic identity, misclassification and contamination.The Microbial Genomes Atlas (MiGA) webserver: taxonomic and gene diversity analysis of Archaea and Bacteria at the whole genome level.Single-Cell Genomics Reveals a Diverse Metabolic Potential of Uncultivated -Related Deltaproteobacteria Widely Distributed in Marine Sediment Taxon-Driven Functional Shifts Associated with Storm Flow in an Urban Stream Microbial Community Methanotrophy across a natural permafrost thaw environment Genomic and Biotechnological Characterization of the Heavy-Metal Resistant, Arsenic-Oxidizing Bacterium Ensifer sp. M14 imGLAD: accurate detection and quantification of target organisms in metagenomes Genomic Description of ' Abyssubacteria,' a Novel Subsurface Lineage Within the Candidate Phylum Hydrogenedentes

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MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences.

http://www.wikidata.org/entity/Q35109643

description

2014 nî lūn-bûn

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2014 թուականի Մարտին հրատարակուած գիտական յօդուած

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2014 թվականի մարտին հրատարակված գիտական հոդված

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2014年の論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年论文

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name

MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences.

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MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences.

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type

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MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences.

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MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences.

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prefLabel

MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences.

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MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences.

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Nucleic Acids Research

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MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences.

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Chengwei Luo

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Konstantinos T Konstantinidis

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P2860

Enterotypes of the human gut microbiome

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Integrative analysis of environmental sequences using MEGAN4

Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource

MUSCLE: multiple sequence alignment with high accuracy and high throughput

Ab initio gene identification in metagenomic sequences

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

BLAT--the BLAST-like alignment tool

Single cell genomics: an individual look at microbes

Pfam: multiple sequence alignments and HMM-profiles of protein domains

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10.1093/NAR/GKU169

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8

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42

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Luis Miguel Rodríguez-R

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2014-03-03T00:00:00Z

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260484825

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