Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX. - Wikidata - awgldk - TriplyDB

Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX.

Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX.

http://www.wikidata.org/entity/Q35145330

about

Ancient and modern environmental DNA Genomic and archaeological evidence suggest a dual origin of domestic dogs Fast, Accurate and Automatic Ancient Nucleosome and Methylation Maps with epiPALEOMIX Early cave art and ancient DNA record the origin of European bison Toward high-resolution population genomics using archaeological samples AdapterRemoval v2: rapid adapter trimming, identification, and read merging Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments Pros and cons of methylation-based enrichment methods for ancient DNA Mitochondrial genomes reveal the extinct Hippidion as an outgroup to all living equids Impacts of low coverage depths and post-mortem DNA damage on variant calling: a simulation study Speciation with gene flow in equids despite extensive chromosomal plasticity Prehistoric genomes reveal the genetic foundation and cost of horse domestication A genomewide catalogue of single nucleotide polymorphisms in white-beaked and Atlantic white-sided dolphins.metaBIT, an integrative and automated metagenomic pipeline for analysing microbial profiles from high-throughput sequencing shotgun data.Aboriginal mitogenomes reveal 50,000 years of regionalism in Australia.The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics.Detecting taxonomic and phylogenetic signals in equid cheek teeth: towards new palaeontological and archaeological proxies.An ‛Aukward' Tale: A Genetic Approach to Discover the Whereabouts of the Last Great Auks Paleogenomics. Genomic structure in Europeans dating back at least 36,200 years.Shotgun microbial profiling of fossil remains.Reconstructing ancient genomes and epigenomes.Comparing the performance of three ancient DNA extraction methods for high-throughput sequencing.Mitochondrial Genetic Diversity of Eurasian Red Squirrels (Sciurus vulgaris) from Denmark.Regulatory mutations in TBX3 disrupt asymmetric hair pigmentation that underlies Dun camouflage color in horses.Experimental conditions improving in-solution target enrichment for ancient DNA.Characterizing restriction enzyme-associated loci in historic ragweed (Ambrosia artemisiifolia) voucher specimens using custom-designed RNA probes.Combining bleach and mild predigestion improves ancient DNA recovery from bones.The efficacy of high-throughput sequencing and target enrichment on charred archaeobotanical remains Evolutionary Patterns and Processes: Lessons from Ancient DNA.Ancient genomic changes associated with domestication of the horse.The earliest maize from San Marcos Tehuacán is a partial domesticate with genomic evidence of inbreeding.Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing.Ancient DNA reveals the Arctic origin of Viking Age cod from Haithabu, Germany.Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds.DNA Sequencing in Cultural Heritage.EAGER: efficient ancient genome reconstruction.Continuity and Admixture in the Last Five Millennia of Levantine History from Ancient Canaanite and Present-Day Lebanese Genome Sequences.Improving ancient DNA genome assembly.Ancient genomes show social and reproductive behavior of early Upper Paleolithic foragers.An expanded mammal mitogenome dataset from Southeast Asia.

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Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX.

http://www.wikidata.org/entity/Q35145330

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2014 nî lūn-bûn

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2014 թուականի Ապրիլին հրատարակուած գիտական յօդուած

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2014 թվականի ապրիլին հրատարակված գիտական հոդված

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2014年の論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年论文

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Characterization of ancient an ...... nomic analysis using PALEOMIX.

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Characterization of ancient an ...... nomic analysis using PALEOMIX.

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Characterization of ancient an ...... nomic analysis using PALEOMIX.

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Nature Protocols

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Characterization of ancient an ...... nomic analysis using PALEOMIX.

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Aurélien Ginolhac

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Hákon Jónsson

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Michael D Martin

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Robert Schaefer

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Ruth Fernández

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P2860

Mitochondrial phylogenomics of modern and ancient equids

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine

Ancient human genome sequence of an extinct Palaeo-Eskimo

A Draft Sequence of the Neandertal Genome

An integrated map of genetic variation from 1,092 human genomes

Genetic history of an archaic hominin group from Denisova Cave in Siberia

The complete mitochondrial DNA genome of an unknown hominin from southern Siberia

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

The sequence and de novo assembly of the giant panda genome

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1056-1082

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10.1038/NPROT.2014.063

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5

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9

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Ludovic Orlando

Clio Der Sarkissian

Mikkel Schubert

Eske Willerslev

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2014-04-10T00:00:00Z

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261603895

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1020179577

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24722405

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