Regulation of nucleosome landscape and transcription factor targeting at tissue-specific enhancers by BRG1 - Wikidata - awgldk - TriplyDB

Regulation of nucleosome landscape and transcription factor targeting at tissue-specific enhancers by BRG1

Regulation of nucleosome landscape and transcription factor targeting at tissue-specific enhancers by BRG1

http://www.wikidata.org/entity/Q35451769

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Master regulatory GATA transcription factors: mechanistic principles and emerging links to hematologic malignancies Towards an understanding of cell-specific functions of signal-dependent transcription factors Using epigenetic mechanisms to understand the impact of common disease causing alleles Setd1a and NURF mediate chromatin dynamics and gene regulation during erythroid lineage commitment and differentiation Genome-wide nucleosome positioning during embryonic stem cell development Association of levels of fasting glucose and insulin with rare variants at the chromosome 11p11.2-MADD locus: Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Targeted Sequencing Study Annotation of functional variation in personal genomes using RegulomeDB The SWI/SNF chromatin remodelling complex is required for maintenance of lineage specific enhancers Large-scale quality analysis of published ChIP-seq data.Correlating histone modification patterns with gene expression data during hematopoiesis.Improved nucleosome-positioning algorithm iNPS for accurate nucleosome positioning from sequencing data.Inherited variants in genes somatically mutated in thyroid cancer.Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis.Role of LDB1 in the transition from chromatin looping to transcription activation.Nucleosome positioning: resources and tools online.Promoter-proximal transcription factor binding is transcriptionally active when coupled with nucleosome repositioning in immediate vicinity.Accurate prediction of inducible transcription factor binding intensities in vivo.Integration of Hi-C and ChIP-seq data reveals distinct types of chromatin linkages Mechanisms by which SMARCB1 loss drives rhabdoid tumor growth.Nucleosomal occupancy changes locally over key regulatory regions during cell differentiation and reprogramming.Genome accessibility is widely preserved and locally modulated during mitosis.MACE: model based analysis of ChIP-exo.BRG1/SMARCA4 inactivation promotes non-small cell lung cancer aggressiveness by altering chromatin organization.Dynamic shifts in occupancy by TAL1 are guided by GATA factors and drive large-scale reprogramming of gene expression during hematopoiesis.Dynamic regulation of epigenomic landscapes during hematopoiesis.Brg1 modulates enhancer activation in mesoderm lineage commitment.Altered chromatin occupancy of master regulators underlies evolutionary divergence in the transcriptional landscape of erythroid differentiation Transcription factor MITF and remodeller BRG1 define chromatin organisation at regulatory elements in melanoma cells Glucocorticoid Receptor Transcriptional Activation via the BRG1-Dependent Recruitment of TOP2β and Ku70/86.BAF250a Protein Regulates Nucleosome Occupancy and Histone Modifications in Priming Embryonic Stem Cell Differentiation Differential DNase I hypersensitivity reveals factor-dependent chromatin dynamics.Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements The chromatin fingerprint of gene enhancer elements.Identification of recurrent combinatorial patterns of chromatin modifications at promoters across various tissue types.An approach of identifying differential nucleosome regions in multiple samples.T-cell acute leukemia 1 (TAL1) regulation of erythropoietin receptor and association with excessive erythrocytosis.Brg1 coordinates multiple processes during retinogenesis and is a tumor suppressor in retinoblastoma.H2A.Z facilitates access of active and repressive complexes to chromatin in embryonic stem cell self-renewal and differentiation.Imprinting at the PLAGL1 domain is contained within a 70-kb CTCF/cohesin-mediated non-allelic chromatin loop.GATA3-dependent cellular reprogramming requires activation-domain dependent recruitment of a chromatin remodeler.

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Regulation of nucleosome landscape and transcription factor targeting at tissue-specific enhancers by BRG1

http://www.wikidata.org/entity/Q35451769

description

2011 nî lūn-bûn

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2011 թուականի Յուլիսին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի հուլիսին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

Regulation of nucleosome lands ...... sue-specific enhancers by BRG1

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Regulation of nucleosome lands ...... sue-specific enhancers by BRG1

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type

label

Regulation of nucleosome lands ...... sue-specific enhancers by BRG1

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Regulation of nucleosome lands ...... sue-specific enhancers by BRG1

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prefLabel

Regulation of nucleosome lands ...... sue-specific enhancers by BRG1

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Regulation of nucleosome lands ...... sue-specific enhancers by BRG1

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Genome Research

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Regulation of nucleosome lands ...... sue-specific enhancers by BRG1

@en

P2093

Daniel Northrup

http://www.w3.org/2001/XMLSchema#string

Dustin E Schones

http://www.w3.org/2001/XMLSchema#string

Kairong Cui

http://www.w3.org/2001/XMLSchema#string

Keji Zhao

http://www.w3.org/2001/XMLSchema#string

Luca Gattinoni

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Qingsong Tang

http://www.w3.org/2001/XMLSchema#string

River Ybarra

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Suming Huang

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P2860

Model-based analysis of ChIP-Seq (MACS)

A SWI/SNF-related chromatin remodeling complex, E-RC1, is required for tissue-specific transcriptional regulation by EKLF in vitro

Rapid and phosphoinositol-dependent binding of the SWI/SNF-like BAF complex to chromatin after T lymphocyte receptor signaling

Mapping and quantifying mammalian transcriptomes by RNA-Seq

Association of erythroid transcription factors: complexes involving the LIM protein RBTN2 and the zinc-finger protein GATA1

Purification and biochemical heterogeneity of the mammalian SWI-SNF complex

The LIM-only protein Lmo2 is a bridging molecule assembling an erythroid, DNA-binding complex which includes the TAL1, E47, GATA-1 and Ldb1/NLI proteins

Tissue-specific and developmental stage-specific DNA binding by a mammalian SWI/SNF complex associated with human fetal-to-adult globin gene switching

MEME: discovering and analyzing DNA and protein sequence motifs

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

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1650-1658

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scholarly article

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10.1101/GR.121145.111

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10

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21

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Nicholas P. Restifo

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2011-07-27T00:00:00Z

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51526945

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3202282

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