A model for Escherichia coli chromosome packaging supports transcription factor-induced DNA domain formation
about
The role of loops on the order of eukaryotes and prokaryotesThe statistical-mechanics of chromosome conformation captureCaulobacter chromosome in vivo configuration matches model predictions for a supercoiled polymer in a cell-like confinement.Nonspecific bridging-induced attraction drives clustering of DNA-binding proteins and genome organization.Chromosome segregation by the Escherichia coli Min system.The impact of entropy on the spatial organization of synaptonemal complexes within the cell nucleusModeling and experimental methods to probe the link between global transcription and spatial organization of chromosomes.In vivo facilitated diffusion model.Computational analyses of transcriptomic data reveal the dynamic organization of the Escherichia coli chromosome under different conditions.Segregation of chromosome arms in growing and non-growing Escherichia coli cells.Modelling of crowded polymers elucidate effects of double-strand breaks in topological domains of bacterial chromosomesSupra-operonic clusters of functionally related genes (SOCs) are a source of horizontal gene co-transfers.Higher-order chromatin structure: bridging physics and biology.DNA looping in prokaryotes: experimental and theoretical approaches.Effect of DNA conformation on facilitated diffusion.Integration of syntactic and semantic properties of the DNA code reveals chromosomes as thermodynamic machines converting energy into information.Polymers under confinement: single polymers, how they interact, and as model chromosomes.Coevolution of the Organization and Structure of Prokaryotic Genomes.DNA thermodynamic stability and supercoil dynamics determine the gene expression program during the bacterial growth cycle.Features of genomic organization in a nucleotide-resolution molecular model of the Escherichia coli chromosome.Effect of capsid confinement on the chromatin organization of the SV40 minichromosomeRegulatory consequences of gene translocation in bacteria.Polymer modeling of the E. coli genome reveals the involvement of locus positioning and macrodomain structuring for the control of chromosome conformation and segregation.Transcriptional regulatory network shapes the genome structure of Saccharomyces cerevisiae.Chromosomal organization of transcription: in a nutshell.Combined collapse by bridging and self-adhesion in a prototypical polymer model inspired by the bacterial nucleoid.Effects of molecular crowding and confinement on the spatial organization of a biopolymer.Chromosome-like organization of an asymmetrical ring polymer confined in a cylindrical space.Looped star polymers show conformational transition from spherical to flat toroidal shapes.Multidisciplinary perspectives on bacterial genome organization and dynamicsThe effect of macromolecular crowding on mobility of biomolecules, association kinetics, and gene expression in living cells
P2860
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P2860
A model for Escherichia coli chromosome packaging supports transcription factor-induced DNA domain formation
description
2011 nî lūn-bûn
@nan
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
2011年论文
@zh
2011年论文
@zh-cn
name
A model for Escherichia coli c ...... r-induced DNA domain formation
@ast
A model for Escherichia coli c ...... r-induced DNA domain formation
@en
type
label
A model for Escherichia coli c ...... r-induced DNA domain formation
@ast
A model for Escherichia coli c ...... r-induced DNA domain formation
@en
prefLabel
A model for Escherichia coli c ...... r-induced DNA domain formation
@ast
A model for Escherichia coli c ...... r-induced DNA domain formation
@en
P2093
P2860
P356
P1476
A model for Escherichia coli c ...... r-induced DNA domain formation
@en
P2093
Dieter W Heermann
Miriam Fritsche
Paul A Wiggins
Songling Li
P2860
P304
P356
10.1093/NAR/GKR779
P407
P577
2011-10-05T00:00:00Z