BarraCUDA - a fast short read sequence aligner using graphics processing units - Wikidata - awgldk - TriplyDB

BarraCUDA - a fast short read sequence aligner using graphics processing units

BarraCUDA - a fast short read sequence aligner using graphics processing units

http://www.wikidata.org/entity/Q35753489

about

Alignment of Short Reads: A Crucial Step for Application of Next-Generation Sequencing Data in Precision Medicine High throughput sequencing approaches to mutation discovery in the mouse MaxSSmap: a GPU program for mapping divergent short reads to genomes with the maximum scoring subsequence SOAP3-dp: fast, accurate and sensitive GPU-based short read aligner Toward reliable biomarker signatures in the age of liquid biopsies - how to standardize the small RNA-Seq workflow G-CNV: A GPU-Based Tool for Preparing Data to Detect CNVs with Read-Depth Methods.SparkBWA: Speeding Up the Alignment of High-Throughput DNA Sequencing Data.Short Read Mapping: An Algorithmic Tour.A tool for mapping Single Nucleotide Polymorphisms using Graphics Processing Units.GPU-BSM: a GPU-based tool to map bisulfite-treated reads.Fast inexact mapping using advanced tree exploration on backward search methods MICA: A fast short-read aligner that takes full advantage of Many Integrated Core Architecture (MIC).Parallel and Scalable Short-Read Alignment on Multi-Core Clusters Using UPC+.Removing duplicate reads using graphics processing units.Exploiting GPUs in virtual machine for BioCloud Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations.Accelerating Wright-Fisher Forward Simulations on the Graphics Processing Unit.Graphics processing units in bioinformatics, computational biology and systems biology.sBWT: memory efficient implementation of the hardware-acceleration-friendly Schindler transform for the fast biological sequence mapping.Genetically improved BarraCUDA.Sequence alignment tools: one parallel pattern to rule them all?Massively parallel read mapping on GPUs with the q-group index and PEANUT.Challenges in the Setup of Large-scale Next-Generation Sequencing Analysis Workflows.Analysis of DNA modifications in aging research.Improving CUDA DNA Analysis Software with Genetic Programming

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BarraCUDA - a fast short read sequence aligner using graphics processing units

http://www.wikidata.org/entity/Q35753489

description

2012 nî lūn-bûn

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2012年の論文

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2012年論文

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name

BarraCUDA - a fast short read sequence aligner using graphics processing units

@ast

BarraCUDA - a fast short read sequence aligner using graphics processing units

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type

label

BarraCUDA - a fast short read sequence aligner using graphics processing units

@ast

BarraCUDA - a fast short read sequence aligner using graphics processing units

@en

prefLabel

BarraCUDA - a fast short read sequence aligner using graphics processing units

@ast

BarraCUDA - a fast short read sequence aligner using graphics processing units

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BMC Research Notes

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BarraCUDA - a fast short read sequence aligner using graphics processing units

@en

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Brian Yh Lam

http://www.w3.org/2001/XMLSchema#string

Dag Lyberg

http://www.w3.org/2001/XMLSchema#string

Graham Pullan

http://www.w3.org/2001/XMLSchema#string

Ian McFarlane

http://www.w3.org/2001/XMLSchema#string

Ming Sin Cheung

http://www.w3.org/2001/XMLSchema#string

Simon Lam

http://www.w3.org/2001/XMLSchema#string

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

High-throughput sequence alignment using Graphics Processing Units

The complete genome of an individual by massively parallel DNA sequencing

Genome sequencing in microfabricated high-density picolitre reactors

RNA-Seq: a revolutionary tool for transcriptomics

A map of human genome variation from population-scale sequencing

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

Mapping short DNA sequencing reads and calling variants using mapping quality scores

A complete Neandertal mitochondrial genome sequence determined by high-throughput sequencing

Fast and accurate short read alignment with Burrows-Wheeler transform

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27

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scholarly article

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10.1186/1756-0500-5-27

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5

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Giles See How Yeo

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2012-01-13T00:00:00Z

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221746811

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1052295320

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22244497

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3278344

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