Topological constraints: using RNA secondary structure to model 3D conformation, folding pathways, and dynamic adaptation.
about
Unveiling Inherent Degeneracies in Determining Population-Weighted Ensembles of Interdomain Orientational Distributions Using NMR Residual Dipolar Couplings: Application to RNA Helix Junction Helix Motifs.Crystal structure of group II intron domain 1 reveals a template for RNA assemblyDetermining RNA three-dimensional structures using low-resolution data.Hierarchy of RNA functional dynamics.Theory and Modeling of RNA Structure and Interactions with Metal Ions and Small Molecules.Topological constraints are major determinants of tRNA tertiary structure and dynamics and provide basis for tertiary folding cooperativity.Efficient in silico exploration of RNA interhelical conformations using Euler angles and WExploreDynamic motions of the HIV-1 frameshift site RNA.New insights into the fundamental role of topological constraints as a determinant of two-way junction conformationFunctional complexity and regulation through RNA dynamicsThree-dimensional RNA structure refinement by hydroxyl radical probing.Predicting 3D Structure, Flexibility, and Stability of RNA Hairpins in Monovalent and Divalent Ion SolutionsMapping L1 ligase ribozyme conformational switch.Secondary structure encodes a cooperative tertiary folding funnel in the Azoarcus ribozyme.Modulating RNA Alignment Using Directional Dynamic Kinks: Application in Determining an Atomic-Resolution Ensemble for a Hairpin using NMR Residual Dipolar Couplings.Advances in the determination of nucleic acid conformational ensemblesAn unusual topological structure of the HIV-1 Rev response element.Coarse grained models reveal essential contributions of topological constraints to the conformational free energy of RNA bulges.NMR studies of nucleic acid dynamicsElucidating molecular motion through structural and dynamic filters of energy-minimized conformer ensemblesDirect identification of base-paired RNA nucleotides by correlated chemical probing.RNA secondary structure modeling at consistent high accuracy using differential SHAPE.Helix-length compensation studies reveal the adaptability of the VS ribozyme architecture.The structure of the genotype-phenotype map strongly constrains the evolution of non-coding RNA.Function by Structure: Spotlights on Xist Long Non-coding RNA.Tuning RNA folding and function through rational design of junction topology.A coarse-grained model with implicit salt for RNAs: predicting 3D structure, stability and salt effect.Characterizing the bending and flexibility induced by bulges in DNA duplexes.Predicting 3D structure and stability of RNA pseudoknots in monovalent and divalent ion solutions.
P2860
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P2860
Topological constraints: using RNA secondary structure to model 3D conformation, folding pathways, and dynamic adaptation.
description
2011 nî lūn-bûn
@nan
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
2011年论文
@zh
2011年论文
@zh-cn
name
Topological constraints: using ...... hways, and dynamic adaptation.
@ast
Topological constraints: using ...... hways, and dynamic adaptation.
@en
type
label
Topological constraints: using ...... hways, and dynamic adaptation.
@ast
Topological constraints: using ...... hways, and dynamic adaptation.
@en
prefLabel
Topological constraints: using ...... hways, and dynamic adaptation.
@ast
Topological constraints: using ...... hways, and dynamic adaptation.
@en
P2093
P2860
P1476
Topological constraints: using ...... hways, and dynamic adaptation.
@en
P2093
Anthony M Mustoe
Charles L Brooks
Hashim M Al-Hashimi
Maximillian H Bailor
P2860
P304
P356
10.1016/J.SBI.2011.03.009
P577
2011-04-14T00:00:00Z