Inching toward reality: an improved likelihood model of sequence evolution.
about
Logarithmic gap costs decrease alignment accuracyBenchmarking tools for the alignment of functional noncoding DNAEvolutionary distance estimation and fidelity of pair wise sequence alignmentEvolutionary models for insertions and deletions in a probabilistic modeling framework.A probabilistic model for the evolution of RNA structureMultiple sequence alignment accuracy and evolutionary distance estimationSIMPROT: using an empirically determined indel distribution in simulations of protein evolution.General continuous-time Markov model of sequence evolution via insertions/deletions: are alignment probabilities factorable?Infinitely long branches and an informal test of common ancestry.BigFoot: Bayesian alignment and phylogenetic footprinting with MCMCGenome-wide nucleotide-level mammalian ancestor reconstructionJoint Bayesian Estimation of Alignment and PhylogenyHow reliably can we predict the reliability of protein structure predictions?A Generative Angular Model of Protein Structure Evolution.A stochastic evolutionary model for protein structure alignment and phylogeny.Statistical tests for natural selection on regulatory regions based on the strength of transcription factor binding sites.Modern computational approaches for analysing molecular genetic variation data.MaxAlign: maximizing usable data in an alignmentPhylogenetic analysis of bacterial populations in waters of the former Texcoco Lake, Mexico.MCALIGN2: faster, accurate global pairwise alignment of non-coding DNA sequences based on explicit models of indel evolution.Incorporating indel information into phylogeny estimation for rapidly emerging pathogens.Dinucleotide controlled null models for comparative RNA gene prediction.Probabilistic phylogenetic inference with insertions and deletionsAlignment and prediction of cis-regulatory modules based on a probabilistic model of evolution.Evolutionary modeling and prediction of non-coding RNAs in DrosophilaThe construction and use of log-odds substitution scores for multiple sequence alignment.Sigma-2: Multiple sequence alignment of non-coding DNA via an evolutionary model.Evolutionary distances in the twilight zone--a rational kernel approachMutational patterns in RNA secondary structure evolution examined in three RNA families.Simultaneous Bayesian estimation of alignment and phylogeny under a joint model of protein sequence and structure.MAVID: constrained ancestral alignment of multiple sequences.Evolutionary inference via the Poisson Indel Process.Evolution of the RECQ family of helicases: A drosophila homolog, Dmblm, is similar to the human bloom syndrome gene.The age of a unique event polymorphism.The effects of rate variation on ancestral inference in the coalescent.Quantifying variances in comparative RNA secondary structure predictionRegional context in the alignment of biological sequence pairsMarkov chain Monte Carlo without likelihoodsA note on probabilistic models over strings: the linear algebra approach.Efficient representation of uncertainty in multiple sequence alignments using directed acyclic graphs.
P2860
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P2860
Inching toward reality: an improved likelihood model of sequence evolution.
description
1992 nî lūn-bûn
@nan
1992年の論文
@ja
1992年論文
@yue
1992年論文
@zh-hant
1992年論文
@zh-hk
1992年論文
@zh-mo
1992年論文
@zh-tw
1992年论文
@wuu
1992年论文
@zh
1992年论文
@zh-cn
name
Inching toward reality: an improved likelihood model of sequence evolution.
@ast
Inching toward reality: an improved likelihood model of sequence evolution.
@en
type
label
Inching toward reality: an improved likelihood model of sequence evolution.
@ast
Inching toward reality: an improved likelihood model of sequence evolution.
@en
prefLabel
Inching toward reality: an improved likelihood model of sequence evolution.
@ast
Inching toward reality: an improved likelihood model of sequence evolution.
@en
P356
P1476
Inching toward reality: an improved likelihood model of sequence evolution.
@en
P2093
P2888
P356
10.1007/BF00163848
P577
1992-01-01T00:00:00Z