PsRobot: a web-based plant small RNA meta-analysis toolbox. - Wikidata - awgldk - TriplyDB

PsRobot: a web-based plant small RNA meta-analysis toolbox.

PsRobot: a web-based plant small RNA meta-analysis toolbox.

http://www.wikidata.org/entity/Q36088572

about

Correlation analysis of the mRNA and miRNA expression profiles in the nascent synthetic allotetraploid Raphanobrassica A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome Identification of Rapeseed MicroRNAs Involved in Early Stage Seed Germination under Salt and Drought Stresses.Analysis of transcriptional and epigenetic changes in hybrid vigor of allopolyploid Brassica napus uncovers key roles for small RNAs.plantDARIO: web based quantitative and qualitative analysis of small RNA-seq data in plants.Genome-wide identification, characterization and evolutionary analysis of long intergenic noncoding RNAs in cucumber.Identification and characterization of miRNAs in two closely related C4 and C3 species of Cleome by high-throughput sequencing A comparison of performance of plant miRNA target prediction tools and the characterization of features for genome-wide target prediction.The effects of potato virus Y-derived virus small interfering RNAs of three biologically distinct strains on potato (Solanum tuberosum) transcriptome.Small RNAs as important regulators for the hybrid vigour of super-hybrid rice.Novel miRNA and phasiRNA biogenesis networks in soybean roots from two sister lines that are resistant and susceptible to SCN race 4.Unique features of the m6A methylome in Arabidopsis thaliana.Genome-wide identification of non-coding RNAs interacted with microRNAs in soybean.Combined small RNA and degradome sequencing reveals novel miRNAs and their targets in response to low nitrate availability in maize Identification of microRNAs and target genes in the fruit and shoot tip of Lycium chinense: a traditional Chinese medicinal plant.Grafting-responsive miRNAs in cucumber and pumpkin seedlings identified by high-throughput sequencing at whole genome level.Promote connections of young computational biologists in China.Differentially expressed microRNA cohorts in seed development may contribute to poor grain filling of inferior spikelets in rice.Integrated RNA-Seq and sRNA-Seq Analysis Identifies Chilling and Freezing Responsive Key Molecular Players and Pathways in Tea Plant (Camellia sinensis).Endogenous small RNA clusters in plants.Small RNA and degradome sequencing reveals important microRNA function in Astragalus chrysochlorus response to selenium stimuli.Identification of novel drought-responsive microRNAs and trans-acting siRNAs from Sorghum bicolor (L.) Moench by high-throughput sequencing analysis.Characterization and comparative profiling of the small RNA transcriptomes in two phases of flowering in Cymbidium ensifolium.Identification of miRNAs involved in fruit ripening in Cavendish bananas by deep sequencing.Comparative miRNAs analysis of Two contrasting broccoli inbred lines with divergent head-forming capacity under temperature stress.RNA sequencing and functional analysis implicate the regulatory role of long non-coding RNAs in tomato fruit ripening.Identification of Novel and Conserved miRNAs in Leaves of In vitro Grown Citrus reticulata "Lugan" Plantlets by Solexa Sequencing High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs.Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa.To Be a Flower or Fruiting Branch: Insights Revealed by mRNA and Small RNA Transcriptomes from Different Cotton Developmental Stages Combined small RNA and degradome sequencing to identify miRNAs and their targets in response to drought in foxtail millet.Identification and characterization of miRNAs in ripening fruit of Lycium barbarum L. using high-throughput sequencing Identification of conserved and novel microRNAs in Porphyridium purpureum via deep sequencing and bioinformatics.Systematic characterization of novel lncRNAs responding to phosphate starvation in Arabidopsis thaliana Identification of microRNAs Actively Involved in Fatty Acid Biosynthesis in Developing Brassica napus Seeds Using High-Throughput Sequencing Transcriptome Analysis of mRNA and miRNA in Somatic Embryos of Larix leptolepis Subjected to Hydrogen Treatment Genome-wide analysis of tomato long non-coding RNAs and identification as endogenous target mimic for microRNA in response to TYLCV infection Small RNA-Sequencing Links Physiological Changes and RdDM Process to Vegetative-to-Floral Transition in Apple.Identification and characterization of microRNAs in Eucheuma denticulatum by high-throughput sequencing and bioinformatics analysis.PmiRExAt: plant miRNA expression atlas database and web applications.

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P2860

PsRobot: a web-based plant small RNA meta-analysis toolbox.

http://www.wikidata.org/entity/Q36088572

description

2012 nî lūn-bûn

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2012年論文

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name

PsRobot: a web-based plant small RNA meta-analysis toolbox.

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PsRobot: a web-based plant small RNA meta-analysis toolbox.

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type

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PsRobot: a web-based plant small RNA meta-analysis toolbox.

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PsRobot: a web-based plant small RNA meta-analysis toolbox.

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PsRobot: a web-based plant small RNA meta-analysis toolbox.

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Hua-Jun Wu

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Meng Wang

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Tong Chen

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Xiu-Jie Wang

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Ying-Ke Ma

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P2860

Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana.

Mfold web server for nucleic acid folding and hybridization prediction

Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets

miRBase: integrating microRNA annotation and deep-sequencing data

Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis

Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome

MicroRNAs in plants

Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species

ASRP: the Arabidopsis Small RNA Project Database

Clustal W and Clustal X version 2.0

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10.1093/NAR/GKS554

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40

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