Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions - Wikidata - awgldk - TriplyDB

Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions

Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions

http://www.wikidata.org/entity/Q36118451

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Akirin2 is critical for inducing inflammatory genes by bridging IκB-ζ and the SWI/SNF complex Post-transcriptional Regulation of Immunological Responses through Riboclustering Molecular control of activation and priming in macrophages The Many Alternative Faces of Macrophage Activation Phenotypic noise: effects of post-transcriptional regulatory processes affecting mRNA Preparing the first responders: building the inflammatory transcriptome from the ground up Dynamic integration of splicing within gene regulatory pathways Regulation of type I interferon responses Architecture and expression of the nfatc1 gene in lymphocytes Steering tumor progression through the transcriptional response to growth factors and stroma Regulation of alternative splicing by local histone modifications: potential roles for RNA-guided mechanisms Chromatin and epigenetic regulation of pre-mRNA processing Chromatin targeting drugs in cancer and immunity Transcriptional Activation of Inflammatory Genes: Mechanistic Insight into Selectivity and Diversity Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms.The yeast SR-like protein Npl3 links chromatin modification to mRNA processing Modulation of Immune Responses by Exosomes Derived from Antigen-Presenting Cells Serial interactome capture of the human cell nucleus Regulation of MYC expression and differential JQ1 sensitivity in cancer cells An Evolutionarily Conserved PLC-PKD-TFEB Pathway for Host Defense A long noncoding RNA mediates both activation and repression of immune response genes Feedback modulation of cholesterol metabolism by the lipid-responsive non-coding RNA LeXis Genomic analysis of ADAR1 binding and its involvement in multiple RNA processing pathways THOC5 controls 3'end-processing of immediate early genes via interaction with polyadenylation specific factor 100 (CPSF100).Analysis of the transcriptional networks underpinning the activation of murine macrophages by inflammatory mediators Inhibition of U4 snRNA in human cells causes the stable retention of polyadenylated pre-mRNA in the nucleus.Epigenetic control of immunity Calcium Channel CaVα₁ Splice Isoforms - Tissue Specificity and Drug Action.Extensive localization of long noncoding RNAs to the cytosol and mono- and polyribosomal complexes.The RNA-binding protein hnRNPLL induces a T cell alternative splicing program delineated by differential intron retention in polyadenylated RNA.Adventures in time and space: splicing efficiency and RNA polymerase II elongation rate m6A mRNA modifications are deposited in nascent pre-mRNA and are not required for splicing but do specify cytoplasmic turnover.Introduction to cotranscriptional RNA splicing The active enhancer network operated by liganded RXR supports angiogenic activity in macrophages.Functional significance of macrophage-derived exosomes in inflammation and pain Deep sequencing of HIV-infected cells: insights into nascent transcription and host-directed therapy.Extensive remodeling of DC function by rapid maturation-induced transcriptional silencing.DNase I-hypersensitive exons colocalize with promoters and distal regulatory elements.Short intronic repeat sequences facilitate circular RNA production.Kinetic competition during the transcription cycle results in stochastic RNA processing.

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Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions

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Amy Pandya-Jones

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Ann-Jay Tong

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Dev M Bhatt

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Douglas L Black

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The in vivo kinetics of RNA polymerase II elongation during co-transcriptional splicing

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

Mapping and quantifying mammalian transcriptomes by RNA-Seq

NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

Nascent transcript sequencing visualizes transcription at nucleotide resolution.

Chromatin-remodelling factor BRG1 selectively activates a subset of interferon-alpha-inducible genes

Exon tethering in transcription by RNA polymerase II

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