Entropic barriers, transition states, funnels, and exponential protein folding kinetics: a simple model
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Watching proteins fold one molecule at a timeGroEL/ES Chaperonin Modulates the Mechanism and Accelerates the Rate of TIM-Barrel Domain FoldingStatistical analyses of protein folding rates from the view of quantum transition.Golden triangle for folding rates of globular proteins.Estimating diffusivity along a reaction coordinate in the high friction limit: Insights on pulse times in laser-induced nucleation.Alpha-helix formation in a photoswitchable peptide tracked from picoseconds to microseconds by time-resolved IR spectroscopy.Analysis of kinetics using a hybrid maximum-entropy/nonlinear-least-squares method: application to protein folding.Simple continuous and discrete models for simulating replica exchange simulations of protein folding.Extending a spectrin repeat unit. II: rupture behaviorSlow conformational motions that favor sub-picosecond motions important for catalysis.Transition paths, diffusive processes, and preequilibria of protein folding.Ruggedness in the folding landscape of protein L.How kinetics within the unfolded state affects protein folding: an analysis based on markov state models and an ultra-long MD trajectoryRestrictions to protein folding determined by the protein size.The role of high-dimensional diffusive search, stabilization, and frustration in protein folding.Size, motion, and function of the SecY translocon revealed by molecular dynamics simulations with virtual probes.Analytical correlation functions for motion through diffusivity landscapes.Enhanced sampling of the molecular potential energy surface using mutually orthogonal latin squares: application to peptide structures.Protein folding in high-dimensional spaces: hypergutters and the role of nonnative interactions.Electrostatic rate enhancement and transient complex of protein-protein association.Influence of Glu/Arg, Asp/Arg, and Glu/Lys Salt Bridges on α-Helical Stability and Folding KineticsHow long does it take to equilibrate the unfolded state of a protein?Solvent-Exposed Salt Bridges Influence the Kinetics of α-Helix Folding and Unfolding.Structural analysis of kinetic folding intermediates for a TIM barrel protein, indole-3-glycerol phosphate synthase, by hydrogen exchange mass spectrometry and Gō model simulation.Levinthal's question answered … again?Eigenvalues of the homogeneous finite linear one step master equation: applications to downhill folding.Peptide dimerization-dissociation rates from replica exchange molecular dynamics.Golf-course and funnel energy landscapes: Protein folding concepts in martensites.Failure of one-dimensional Smoluchowski diffusion models to describe the duration of conformational rearrangements in floppy, diffusive molecular systems: a case study of polymer cyclization.Entropy-energy decomposition from nonequilibrium work trajectories.Free-energy reconstruction from experiments performed under different biasing programs.Entropy calculations on a reversibly folding peptide: changes in solute free energy cannot explain folding behavior.New dynamical window onto the landscape for forced protein unfolding.Exploring the relationship between funneled energy landscapes and two-state protein folding.Reduction of the Search Space for the Folding of Proteins at the Level of Formation and Assembly of Secondary Structures: A New View on the Solution of Levinthal's Paradox.Conformational Diffusion and Helix Formation Kinetics
P2860
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P2860
Entropic barriers, transition states, funnels, and exponential protein folding kinetics: a simple model
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2000 nî lūn-bûn
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2000年の論文
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2000年学术文章
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2000年学术文章
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2000年学术文章
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2000年学术文章
@zh-my
2000年学术文章
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2000年學術文章
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name
Entropic barriers, transition ...... lding kinetics: a simple model
@ast
Entropic barriers, transition ...... lding kinetics: a simple model
@en
type
label
Entropic barriers, transition ...... lding kinetics: a simple model
@ast
Entropic barriers, transition ...... lding kinetics: a simple model
@en
prefLabel
Entropic barriers, transition ...... lding kinetics: a simple model
@ast
Entropic barriers, transition ...... lding kinetics: a simple model
@en
P2860
P356
P1433
P1476
Entropic barriers, transition ...... lding kinetics: a simple model
@en
P2093
P2860
P304
P356
10.1110/PS.9.3.452
P577
2000-03-01T00:00:00Z