R3D Align: global pairwise alignment of RNA 3D structures using local superpositions.
about
Molecular interactions within the halophilic, thermophilic, and mesophilic prokaryotic ribosomal complexes: clues to environmental adaptation.A deep learning framework for modeling structural features of RNA-binding protein targets.RNA global alignment in the joint sequence-structure space using elastic shape analysis.Re-analysis of cryoEM data on HCV IRES bound to 40S subunit of human ribosome integrated with recent structural information suggests new contact regions between ribosomal proteins and HCV RNARASS: a web server for RNA alignment in the joint sequence-structure spaceSETTER: web server for RNA structure comparison.R3D Align web server for global nucleotide to nucleotide alignments of RNA 3D structuresWebFR3D--a server for finding, aligning and analyzing recurrent RNA 3D motifsRNAMotifScanX: a graph alignment approach for RNA structural motif identification.Effective alignment of RNA pseudoknot structures using partition function posterior log-odds scoresSARA-Coffee web server, a tool for the computation of RNA sequence and structure multiple alignmentsMultiSETTER: web server for multiple RNA structure comparison.CHSalign: A Web Server That Builds upon Junction-Explorer and RNAJAG for Pairwise Alignment of RNA Secondary Structures with Coaxial Helical Stacking.RNA-TVcurve: a Web server for RNA secondary structure comparison based on a multi-scale similarity of its triple vector curve representation.High-throughput sequence analysis reveals structural diversity and improved potency among RNA inhibitors of HIV reverse transcriptase.STAR3D: a stack-based RNA 3D structural alignment toolDETECTING CONFORMATIONAL DIFFERENCES BETWEEN RNA 3D STRUCTURES.Automated classification of RNA 3D motifs and the RNA 3D Motif Atlas.The Nucleic Acid Database: new features and capabilities.Multiple sequence alignment modeling: methods and applications.CompAnnotate: a comparative approach to annotate base-pairing interactions in RNA 3D structures.Evolutionary Origin and Conserved Structural Building Blocks of Riboswitches and Ribosomal RNAs: Riboswitches as Probable Target Sites for Aminoglycosides Interaction.WebSTAR3D: a web server for RNA 3D structural alignment.Computational Methods for Modeling Aptamers and Designing Riboswitches.Topology independent comparison of RNA 3D structures using the CLICK algorithm.RRDB: A comprehensive and nonredundant benchmark for RNA-RNA docking and scoring.SupeRNAlign: a new tool for flexible superposition of homologous RNA structures and inference of accurate structure-based sequence alignments.Rclick: a web server for comparison of RNA 3D structures.
P2860
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P2860
R3D Align: global pairwise alignment of RNA 3D structures using local superpositions.
description
2010 nî lūn-bûn
@nan
2010年の論文
@ja
2010年学术文章
@wuu
2010年学术文章
@zh-cn
2010年学术文章
@zh-hans
2010年学术文章
@zh-my
2010年学术文章
@zh-sg
2010年學術文章
@yue
2010年學術文章
@zh
2010年學術文章
@zh-hant
name
R3D Align: global pairwise alignment of RNA 3D structures using local superpositions.
@ast
R3D Align: global pairwise alignment of RNA 3D structures using local superpositions.
@en
type
label
R3D Align: global pairwise alignment of RNA 3D structures using local superpositions.
@ast
R3D Align: global pairwise alignment of RNA 3D structures using local superpositions.
@en
prefLabel
R3D Align: global pairwise alignment of RNA 3D structures using local superpositions.
@ast
R3D Align: global pairwise alignment of RNA 3D structures using local superpositions.
@en
P2093
P2860
P356
P1433
P1476
R3D Align: global pairwise alignment of RNA 3D structures using local superpositions.
@en
P2093
Craig L Zirbel
Neocles B Leontis
Ryan R Rahrig
P2860
P304
P356
10.1093/BIOINFORMATICS/BTQ506
P407
P577
2010-10-06T00:00:00Z