MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads
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Metagenomics for pathogen detection in public healthDeciphering the bat virome catalog to better understand the ecological diversity of bat viruses and the bat origin of emerging infectious diseasesThe A, C, G, and T of Genome AssemblyMetagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome AnalysisThe Road to Metagenomics: From Microbiology to DNA Sequencing Technologies and BioinformaticsMetagenomics: Retrospect and Prospects in High Throughput AgeRecovering full-length viral genomes from metagenomesNew Technologies for Studying BiofilmsChallenges and opportunities in understanding microbial communities with metagenome assembly (accompanied by IPython Notebook tutorial)Metagenomic surveys of gut microbiotaInsights into novel antimicrobial compounds and antibiotic resistance genes from soil metagenomesComputational meta'omics for microbial community studiesAssessing the human gut microbiota in metabolic diseasesTowards predictive models of the human gut microbiomeBioinformatic approaches for functional annotation and pathway inference in metagenomics dataAn introduction to the analysis of shotgun metagenomic dataWhole-Metagenome-Sequencing-Based Community Profiles of Vitis vinifera L. cv. Corvina Berries Withered in Two Post-harvest Conditions.Metagenomics of Thermophiles with a Focus on Discovery of Novel ThermozymesMetagenomic Assembly: Overview, Challenges and ApplicationsBioinformatics strategies for taxonomy independent binning and visualization of sequences in shotgun metagenomicsRecovering complete and draft population genomes from metagenome datasetsNext-Generation Sequencing: A Review of Technologies and Tools for Wound Microbiome ResearchA Graph-Centric Approach for Metagenome-Guided Peptide and Protein Identification in MetaproteomicsUnravelling core microbial metabolisms in the hypersaline microbial mats of Shark Bay using high-throughput metagenomicsFragmentation and Coverage Variation in Viral Metagenome Assemblies, and Their Effect in Diversity CalculationsOrione, a web-based framework for NGS analysis in microbiologyMetaSort untangles metagenome assembly by reducing microbial community complexityUtilizing de Bruijn graph of metagenome assembly for metatranscriptome analysisMetabolic network-guided binning of metagenomic sequence fragments.Metabolic network modeling of microbial communities.Discovery of new cellulases from the metagenome by a metagenomics-guided strategyImpact of library preparation protocols and template quantity on the metagenomic reconstruction of a mock microbial community.SPA: a short peptide assembler for metagenomic data.Crass: identification and reconstruction of CRISPR from unassembled metagenomic dataPRICE: software for the targeted assembly of components of (Meta) genomic sequence dataReconstructing an ancestral genotype of two hexachlorocyclohexane-degrading Sphingobium species using metagenomic sequence data.Reconstructing a Thauera genome from a hydrogenotrophic-denitrifying consortium using metagenomic sequence data.A scalable and accurate targeted gene assembly tool (SAT-Assembler) for next-generation sequencing data.An ensemble strategy that significantly improves de novo assembly of microbial genomes from metagenomic next-generation sequencing dataMetagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies.
P2860
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P2860
MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads
description
2012 nî lūn-bûn
@nan
2012年の論文
@ja
2012年学术文章
@wuu
2012年学术文章
@zh-cn
2012年学术文章
@zh-hans
2012年学术文章
@zh-my
2012年学术文章
@zh-sg
2012年學術文章
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2012年學術文章
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2012年學術文章
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name
MetaVelvet: an extension of Ve ...... mbly from short sequence reads
@ast
MetaVelvet: an extension of Ve ...... mbly from short sequence reads
@en
type
label
MetaVelvet: an extension of Ve ...... mbly from short sequence reads
@ast
MetaVelvet: an extension of Ve ...... mbly from short sequence reads
@en
prefLabel
MetaVelvet: an extension of Ve ...... mbly from short sequence reads
@ast
MetaVelvet: an extension of Ve ...... mbly from short sequence reads
@en
P2093
P2860
P356
P1476
MetaVelvet: an extension of Ve ...... mbly from short sequence reads
@en
P2093
Hideaki Tanaka
Toshiaki Namiki
Tsuyoshi Hachiya
Yasubumi Sakakibara
P2860
P356
10.1093/NAR/GKS678
P407
P577
2012-07-19T00:00:00Z