methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles
about
Profiling genome-wide DNA methylationBase resolution methylome profiling: considerations in platform selection, data preprocessing and analysisReview of processing and analysis methods for DNA methylation array dataBehavioural traits propagate across generations via segregated iterative-somatic and gametic epigenetic mechanisms.New IDH1 mutant inhibitors for treatment of acute myeloid leukemiaWBSA: web service for bisulfite sequencing data analysis5'-Hydroxymethylcytosine Precedes Loss of CpG Methylation in Enhancers and Genes Undergoing Activation in Cardiomyocyte MaturationTris(1,3-dichloro-2-propyl)phosphate Induces Genome-Wide Hypomethylation within Early Zebrafish EmbryosDNMT3A mutations promote anthracycline resistance in acute myeloid leukemia via impaired nucleosome remodelingBrain feminization requires active repression of masculinization via DNA methylationGobyWeb: simplified management and analysis of gene expression and DNA methylation sequencing dataNext-generation technologies and data analytical approaches for epigenomics.A Bayesian hierarchical model to detect differentially methylated loci from single nucleotide resolution sequencing data.MOABS: model based analysis of bisulfite sequencing data.DMAP: differential methylation analysis package for RRBS and WGBS data.Methy-Pipe: an integrated bioinformatics pipeline for whole genome bisulfite sequencing data analysisExaggerated CpH methylation in the autism-affected brain.Comprehensive analysis of DNA methylation data with RnBeads.WGBSSuite: simulating whole-genome bisulphite sequencing data and benchmarking differential DNA methylation analysis tools.methylPipe and compEpiTools: a suite of R packages for the integrative analysis of epigenomics data.missMethyl: an R package for analyzing data from Illumina's HumanMethylation450 platform.CRCDA--Comprehensive resources for cancer NGS data analysis.A Flexible, Efficient Binomial Mixed Model for Identifying Differential DNA Methylation in Bisulfite Sequencing Data.metilene: fast and sensitive calling of differentially methylated regions from bisulfite sequencing data.Detection of differentially methylated regions from bisulfite-seq data by hidden Markov models incorporating genome-wide methylation level distributions.A full Bayesian partition model for identifying hypo- and hyper-methylated loci from single nucleotide resolution sequencing data.Differential methylation analysis for BS-seq data under general experimental design.An NGS Workflow Blueprint for DNA Sequencing Data and Its Application in Individualized Molecular Oncology.Detection of differentially methylated regions in whole genome bisulfite sequencing data using local Getis-Ord statistics.Statistical challenges in analyzing methylation and long-range chromosomal interaction dataStatistical method evaluation for differentially methylated CpGs in base resolution next-generation DNA sequencing data.Differential DNA methylation at conserved non-genic elements and evidence for transgenerational inheritance following developmental exposure to mono(2-ethylhexyl) phthalate and 5-azacytidine in zebrafishZeb2 Regulates Cell Fate at the Exit from Epiblast State in Mouse Embryonic Stem CellsDNA methylation and Transcriptome Changes Associated with Cisplatin Resistance in Ovarian Cancer.ICF-specific DNMT3B dysfunction interferes with intragenic regulation of mRNA transcription and alternative splicing.Clinical Genomics: Challenges and OpportunitiesIntegration of DNA methylation and gene transcription across nineteen cell types reveals cell type-specific and genomic region-dependent regulatory patterns.Comparative Analysis of Genome Wide DNA Methylation Profiles for the Genic Male Sterile Cabbage Line 01-20S and Its Maintainer Line.Targeted DNA methylation in vivo using an engineered dCas9-MQ1 fusion protein.Epigenetic regulation of lateralized fetal spinal gene expression underlies hemispheric asymmetries
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methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles
description
2012 nî lūn-bûn
@nan
2012年の論文
@ja
2012年学术文章
@wuu
2012年学术文章
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2012年学术文章
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2012年学术文章
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2012年学术文章
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name
methylKit: a comprehensive R p ...... -wide DNA methylation profiles
@ast
methylKit: a comprehensive R p ...... -wide DNA methylation profiles
@en
type
label
methylKit: a comprehensive R p ...... -wide DNA methylation profiles
@ast
methylKit: a comprehensive R p ...... -wide DNA methylation profiles
@en
prefLabel
methylKit: a comprehensive R p ...... -wide DNA methylation profiles
@ast
methylKit: a comprehensive R p ...... -wide DNA methylation profiles
@en
P2093
P2860
P1433
P1476
methylKit: a comprehensive R p ...... -wide DNA methylation profiles
@en
P2093
Ari Melnick
Christopher E Mason
Francine E Garrett-Bakelman
Matthias Kormaksson
P2860
P2888
P356
10.1186/GB-2012-13-10-R87
P577
2012-10-03T00:00:00Z
P5875
P6179
1050578553