Molecular dynamics simulations of d(C-G-C-G-A) X d(T-C-G-C-G) with and without "hydrated" counterions.
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Structural study of DNA duplex containing an N-(2-deoxy- -D-erythro-pentofuranosyl) formamide frameshift by NMR and restrained molecular dynamicsMetal Ion Modeling Using Classical MechanicsMolecular mechanics and dynamics of an abasic frameshift in DNA and comparison to NMR data.A structural basis for a phosphoramide mustard-induced DNA interstrand cross-link at 5'-d(GAC)Harmonic vibrations and thermodynamic stability of a DNA oligomer in monovalent salt solution.Molecular dynamics of an in vacuo model of duplex d(CGCGAATTCGCG) in the B-form based on the amber 3.0 force field.Molecular mechanical simulations on double intercalation of 9-amino acridine into d(CGCGCGC) X d(GCGCGCG): analysis of the physical basis for the neighbor-exclusion principleProtonated base pairs explain the ambiguous pairing properties of O6-methylguanine.Hydration effects on the duplex stability of phosphoramidate DNA-RNA oligomers.RNA tertiary structure of the HIV RRE domain II containing non-Watson-Crick base pairs GG and GA: molecular modeling studies.The pentamer channel stiffening model for drug action on human rhinovirus HRV-1A.DNA stem-loop structures in oligopurine-oligopyrimidine triplexesMolecular dynamics studies of a DNA-binding protein: 2. An evaluation of implicit and explicit solvent models for the molecular dynamics simulation of the Escherichia coli trp repressor.Force field influences in beta-hairpin folding simulationsA molecular dynamics computer simulation of an eight-base-pair DNA fragment in aqueous solution: comparison with experimental two-dimensional NMR data.Molecular mechanical studies of d(CGTACG)2: complex of triostin A with the middle A - T base pairs in either Hoogsteen or Watson-Crick pairingA molecular dynamics simulation of double-helical B-DNA including counterions and waterStatic and statistical bending of DNA evaluated by Monte Carlo simulations.Molecular dynamics simulations suggest that the Eco RI kink is an example of molecular strain.Molecular modeling of nucleic Acid structure: electrostatics and solvation.One left-handed strand in DNA-oligonucleotide complexes?A theoretical study of the aqueous hydration of canonical B d(CGCGAATTCGCG): Monte Carlo simulation and comparison with crystallographic ordered water sites.Molecular dynamics simulation studies for DNA sequence recognition by reactive metabolites of anticancer compounds.DNA structure and perturbation by drug bindingMolecular-dynamics simulations of [Met5]- and [D-Ala2,Met5]-enkephalins. Biological implication of monomeric folded and dimeric unfolded conformationsThe distal residue-CO interaction in carbonmonoxy myoglobins: a molecular dynamics study of two distal histidine tautomers.H-bond stability in the tRNA(Asp) anticodon hairpin: 3 ns of multiple molecular dynamics simulations.An effective enzyme interacting with poly (dT-dA).poly (dT-dA): a dynamic enhancer-repressor action.Molecular-mechanics modelling of drug-DNA structures; the effects of differing dielectric treatment on helix parameters and comparison with a fully solvated structural model.A combined 2D-NMR and molecular dynamics analysis of the structure of the actinomycin D: d(ATGCAT)2 complex.Charge grouping approaches to calculation of electrostatic forces in molecular dynamics of macromolecules.Molecular dynamics and continuum solvent studies of the stability of polyG-polyC and polyA-polyT DNA duplexes in solution.Conformational and helicoidal analysis of 30 PS of molecular dynamics on the d(CGCGAATTCGCG) double helix: "curves", dials and windows.The intrinsic curvature of a 51 bp K-DNA fragment of Leishmania tarentolae: a molecular model.
P2860
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P2860
Molecular dynamics simulations of d(C-G-C-G-A) X d(T-C-G-C-G) with and without "hydrated" counterions.
description
1985 nî lūn-bûn
@nan
1985年の論文
@ja
1985年学术文章
@wuu
1985年学术文章
@zh-cn
1985年学术文章
@zh-hans
1985年学术文章
@zh-my
1985年学术文章
@zh-sg
1985年學術文章
@yue
1985年學術文章
@zh
1985年學術文章
@zh-hant
name
Molecular dynamics simulations ...... ithout "hydrated" counterions.
@ast
Molecular dynamics simulations ...... ithout "hydrated" counterions.
@en
type
label
Molecular dynamics simulations ...... ithout "hydrated" counterions.
@ast
Molecular dynamics simulations ...... ithout "hydrated" counterions.
@en
prefLabel
Molecular dynamics simulations ...... ithout "hydrated" counterions.
@ast
Molecular dynamics simulations ...... ithout "hydrated" counterions.
@en
P2093
P2860
P356
P1476
Molecular dynamics simulations ...... ithout "hydrated" counterions.
@en
P2093
P2860
P304
P356
10.1073/PNAS.82.3.755
P407
P577
1985-02-01T00:00:00Z