ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression - Wikidata - awgldk - TriplyDB

ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression

ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression

http://www.wikidata.org/entity/Q36488613

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Transcriptional Regulation of Tetrapyrrole Biosynthesis in Arabidopsis thaliana Importance of Translocon Subunit Tic56 for rRNA Processing and Chloroplast Ribosome Assembly.PCoM-DB Update: A Protein Co-Migration Database for Photosynthetic Organisms.Peroxiredoxins and Redox Signaling in Plants.SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations.ThaleMine: A Warehouse for Arabidopsis Data Integration and Discovery.PlantExpress: A Database Integrating OryzaExpress and ArthaExpress for Single-species and Cross-species Gene Expression Network Analyses with Microarray-Based Transcriptome Data.Reduction of indole-3-acetic acid methyltransferase activity compensates for high-temperature male sterility in Arabidopsis.Alga-PrAS (Algal Protein Annotation Suite): A Database of Comprehensive Annotation in Algal Proteomes Co-expressed Pathways DataBase for Tomato: a database to predict pathways relevant to a query gene.HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks.CB5C affects the glucosinolate profile in Arabidopsis thaliana Differential Gene Expression and Protein Phosphorylation as Factors Regulating the State of the Arabidopsis SNX1 Protein Complexes in Response to Environmental Stimuli A Meta-Analysis Based Method for Prioritizing Candidate Genes Involved in a Pre-specific Function.Plant genome and transcriptome annotations: from misconceptions to simple solutions.Construction and Optimization of a Large Gene Coexpression Network in Maize Using RNA-Seq Data.Genome-wide analysis of cis-regulatory element structure and discovery of motif-driven gene co-expression networks in grapevine.A Global Coexpression Network Approach for Connecting Genes to Specialized Metabolic Pathways in Plants.ACR11 is an Activator of Plastid-Type Glutamine Synthetase GS2 in Arabidopsis thaliana.Towards integration of population and comparative genomics in forest trees.Genome-Wide Prediction of Metabolic Enzymes, Pathways, and Gene Clusters in Plants.NorWood: a gene expression resource for evo-devo studies of conifer wood development.ccNET: Database of co-expression networks with functional modules for diploid and polyploid Gossypium.The photomorphogenic factors UV-B RECEPTOR 1, ELONGATED HYPOCOTYL 5, and HY5 HOMOLOGUE are part of the UV-B signalling pathway in grapevine and mediate flavonol accumulation in response to the environment Genetic dissection of the Arabidopsis spaceflight transcriptome: Are some responses dispensable for the physiological adaptation of plants to spaceflight?Nitrate Uptake Affects Cell Wall Synthesis and Modeling.Enhancement of cell wall protein SRPP expression during emergent root hair development in Arabidopsis.The AtGRXS3/4/5/7/8 glutaredoxin gene cluster on Arabidopsis thaliana chromosome 4 is coordinately regulated by nitrate and appears to control primary root growth.Arabidopsis β-Amylase2 Is a K+-Requiring, Catalytic Tetramer with Sigmoidal Kinetics.ATTED-II in 2018: A Plant Coexpression Database based on Investigation of Statistical Property of the Mutual Rank Index.Arabidopsis Root-Type Ferredoxin:NADP(H) Oxidoreductase 2 is Involved in Detoxification of Nitrite in Roots.Heat-shock protein 40 is the key farnesylation target in meristem size control, abscisic acid signaling, and drought resistance.Redox regulation of PEP activity during seedling establishment in Arabidopsis thaliana.The Plastid and Mitochondrial Peptidase Network in Arabidopsis thaliana: A Foundation for Testing Genetic Interactions and Functions in Organellar Proteostasis.Integrated omics analysis of specialized metabolism in medicinal plants.PSA3, a Protein on the Stromal Face of the Thylakoid Membrane, Promotes Photosystem I Accumulation in Cooperation with the Assembly Factor PYG7.Suppressors of the Chloroplast Protein Import Mutant tic40 Reveal a Genetic Link between Protein Import and Thylakoid Biogenesis.Construction of Pará rubber tree genome and multi-transcriptome database accelerates rubber researches.Melonet-DB, a Grand RNA-Seq Gene Expression Atlas in Melon (Cucumis melo L.).FLUCTUATING-LIGHT-ACCLIMATION PROTEIN1, Conserved in Oxygenic Phototrophs, Regulates H+ Homeostasis and Non-Photochemical Quenching in Chloroplasts.

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ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression

http://www.wikidata.org/entity/Q36488613

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2015 nî lūn-bûn

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2015年の論文

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2015年学术文章

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2015年学术文章

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2015年学术文章

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2015年學術文章

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2015年學術文章

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ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression

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Kengo Kinoshita

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Takeshi Obayashi

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Yuichi Aoki

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P2860

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

The yeast coexpression network has a small-world, scale-free architecture and can be explained by a simple model

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

NCBI GEO: archive for functional genomics data sets--update

Prediction of gene function by genome-scale expression analysis: prostate cancer-associated genes

Cluster analysis and display of genome-wide expression patterns

Reuse of public genome-wide gene expression data

A gene-coexpression network for global discovery of conserved genetic modules

COXPRESdb: a database of comparative gene coexpression networks of eleven species for mammals.

ATTED-II in 2014: evaluation of gene coexpression in agriculturally important plants.

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Yasunobu Okamura

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